RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 TRAV1-1A0A0B4J248 108 aa13.84□□□□□ -0.19
DDX54-207ENST00000550016 A0A1B0GV50 99 aa13.84□□□□□ -0.19
DDX54-207ENST00000550016 CST9LP1Q5W188 147 aa13.84□□□□□ -0.19
DDX54-207ENST00000550016 TMEM263Q8WUH6 116 aaKnown RBP13.84□□□□□ -0.19
DDX54-207ENST00000550016 LINC00467Q9BRT7 94 aa13.84□□□□□ -0.19
DDX54-207ENST00000550016 PLAC8L1A1L4L8 177 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
DDX54-207ENST00000550016 PAGE4O60829 102 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 PPT1P50897 306 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 TMEM75Q8N9X5 138 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 RNASE8Q8TDE3 154 aaKnown RBP13.83□□□□□ -0.2
DDX54-207ENST00000550016 TVP23CQ96ET8 276 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 SGK494Q96LW2 274 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 NDFIP1Q9BT67 221 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 TREM1Q9NP99 234 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 PSG8Q9UQ74 426 aa13.83□□□□□ -0.2
DDX54-207ENST00000550016 KLK5Q9Y337 293 aaPredicted RBP13.83□□□□□ -0.2
DDX54-207ENST00000550016 LYRM9A8MSI8 78 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 C11orf94C9JXX5 98 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 TEX46H3BTG2 121 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 PEX7O00628 323 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 IGLV2-11P01706 119 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 FLI1Q01543 452 aaPredicted RBP13.82□□□□□ -0.2
DDX54-207ENST00000550016 Q6ZTC4 211 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 ZNF767PQ75MW2 155 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 HIST1H2BAQ96A08 127 aa13.82□□□□□ -0.2
DDX54-207ENST00000550016 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
DDX54-207ENST00000550016 F6UZH7 168 aa13.81□□□□□ -0.2
DDX54-207ENST00000550016 RGS13O14921 159 aa13.81□□□□□ -0.2
DDX54-207ENST00000550016 Q6AWC8 147 aa13.81□□□□□ -0.2
DDX54-207ENST00000550016 Q6ZQT7 251 aa13.81□□□□□ -0.2
DDX54-207ENST00000550016 EIF4E3Q8N5X7 224 aaKnown RBP13.81□□□□□ -0.2
DDX54-207ENST00000550016 TCEAL7Q9BRU2 100 aa13.81□□□□□ -0.2
DDX54-207ENST00000550016 TRAV10A0A0B4J240 114 aa13.8□□□□□ -0.2
DDX54-207ENST00000550016 ANXA2RQ3ZCQ2 193 aa13.8□□□□□ -0.2
DDX54-207ENST00000550016 PRNTQ86SH4 94 aa13.8□□□□□ -0.2
DDX54-207ENST00000550016 LINC00479Q96M42 142 aa13.8□□□□□ -0.2
DDX54-207ENST00000550016 BOLA1Q9Y3E2 137 aa13.8□□□□□ -0.2
DDX54-207ENST00000550016 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 TRAV34A0A0B4J273 112 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 CBY3A6NI87 242 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 ATP5G3P48201 142 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 DAD1P61803 113 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 CCL20P78556 96 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 SAPCD1Q5SSQ6 148 aa13.79□□□□□ -0.2
DDX54-207ENST00000550016 SNURFLB1AK76 121 aa13.78□□□□□ -0.2
DDX54-207ENST00000550016 ALKAL2Q6UX46 152 aa13.78□□□□□ -0.2
DDX54-207ENST00000550016 ZNF680Q8NEM1 530 aa13.78□□□□□ -0.2
DDX54-207ENST00000550016 C2CD4CQ8TF44 421 aa13.78□□□□□ -0.2
DDX54-207ENST00000550016 NOP10Q9NPE3 64 aaKnown RBP13.78□□□□□ -0.2
DDX54-207ENST00000550016 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
DDX54-207ENST00000550016 GNG13Q9P2W3 67 aa13.78□□□□□ -0.2
DDX54-207ENST00000550016 DEFB131BA0A096LNP1 70 aa13.77□□□□□ -0.21
DDX54-207ENST00000550016 TRAV21A0A0B4J279 112 aa13.77□□□□□ -0.21
DDX54-207ENST00000550016 C8orf49Q96NF6 230 aa13.77□□□□□ -0.21
DDX54-207ENST00000550016 KLF12Q9Y4X4 402 aa13.77□□□□□ -0.21
DDX54-207ENST00000550016 DEFB130BP0DP73 79 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 DEFB130AP0DP74 79 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 SMUG1Q53HV7 270 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 MUC21Q5SSG8 566 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 FAM159AQ6UWV7 190 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 C11orf72Q8NBR9 251 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 FMC1Q96HJ9 113 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 GSN-AS1Q9NRJ2 163 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 TP53TG3Q9ULZ0 132 aa13.76□□□□□ -0.21
DDX54-207ENST00000550016 DAZ2Q13117 558 aaKnown RBP13.75□□□□□ -0.21
DDX54-207ENST00000550016 IBA57Q5T440 356 aaKnown RBP13.75□□□□□ -0.21
DDX54-207ENST00000550016 TRBV6-1A0A0K0K1D8 114 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 GCGP01275 180 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 AKR1C3P42330 323 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 ZNF80P51504 273 aaPredicted RBP13.74□□□□□ -0.21
DDX54-207ENST00000550016 UBE2G1P62253 170 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 BLOC1S1P78537 153 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 Q86TA4 180 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
DDX54-207ENST00000550016 IGLL5B9A064 214 aa13.73□□□□□ -0.21
DDX54-207ENST00000550016 S100A9P06702 114 aaKnown RBP13.73□□□□□ -0.21
DDX54-207ENST00000550016 TCL1AP56279 114 aa13.73□□□□□ -0.21
DDX54-207ENST00000550016 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
DDX54-207ENST00000550016 TDRG1Q3Y452 100 aa13.73□□□□□ -0.21
DDX54-207ENST00000550016 TXNDC17Q9BRA2 123 aa13.73□□□□□ -0.21
DDX54-207ENST00000550016 NAGKQ9UJ70 344 aa13.73□□□□□ -0.21
DDX54-207ENST00000550016 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 IFNA1P01562 189 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 PFN1P07737 140 aaKnown RBP13.72□□□□□ -0.21
DDX54-207ENST00000550016 TCTAP57738 103 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 ZNF415Q09FC8 603 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 TMEM183AQ8IXX5 376 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 LINC00612Q8N6U2 182 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 STARD9Q9P2P6 4700 aa13.72□□□□□ -0.21
DDX54-207ENST00000550016 TRGV11A0A075B6L2 103 aa13.71□□□□□ -0.21
DDX54-207ENST00000550016 HTN3P15516 51 aa13.71□□□□□ -0.21
DDX54-207ENST00000550016 KCNS1Q96KK3 526 aa13.71□□□□□ -0.21
DDX54-207ENST00000550016 GAGE12BA1L429 117 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 GAGE7O76087 117 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 LTAP01374 205 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 GAGE12FP0CL80 117 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 GAGE12GP0CL81 117 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 GAGE12IP0CL82 117 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 COX8CQ7Z4L0 72 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms