RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 CTXND1A0A1B0GTU2 59 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 KANTRA0A1W2PQU2 76 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 HMSDA8MTL9 139 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 GGTLC3B5MD39 225 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 BCL2L11O43521 198 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 ZNF324O75467 553 aaPredicted RBP8.37□□□□□ -1.07
RAB5C-204ENST00000547517 FGF8P55075 233 aaPredicted RBP8.37□□□□□ -1.07
RAB5C-204ENST00000547517 ZNF471Q9BX82 626 aaPredicted RBP8.37□□□□□ -1.07
RAB5C-204ENST00000547517 A0A0D9SG52 128 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 GAGE12BA1L429 117 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 F6UZH7 168 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 GAGE7O76087 117 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 IFNA7P01567 189 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 TMEM88Q6PEY1 159 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 EIF4E3Q8N5X7 224 aaKnown RBP8.36□□□□□ -1.07
RAB5C-204ENST00000547517 C5orf17Q8NAS9 161 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 ZNF680Q8NEM1 530 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 SUN5Q8TC36 379 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 TMED6Q8WW62 240 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 LINC00467Q9BRT7 94 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 GSN-AS1Q9NRJ2 163 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 KMT2AQ03164 3969 aa8.36□□□□□ -1.07
RAB5C-204ENST00000547517 IGHV1OR15-1A0A075B7D0 117 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 F5H768 121 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 TCRAP04437 139 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 ATP5G1P05496 136 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 ATP5G3P48201 142 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 UBE2G2P60604 165 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 ANXA2RQ3ZCQ2 193 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 MUC21Q5SSG8 566 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 ARL6IP6Q8N6S5 226 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 FAM210BQ96KR6 192 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 SGK494Q96LW2 274 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 TMPRSS5Q9H3S3 457 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 NAGKQ9UJ70 344 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 TP53TG3Q9ULZ0 132 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
RAB5C-204ENST00000547517 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 FHITP49789 147 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 RAB14P61106 215 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 SUMO1P63165 101 aaKnown RBP8.34□□□□□ -1.07
RAB5C-204ENST00000547517 Q6AWC8 147 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 Q6ZTI0 123 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 SLC7A5P1Q8MH63 180 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 C9orf62Q8N4C0 152 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 TREM1Q9NP99 234 aa8.34□□□□□ -1.07
RAB5C-204ENST00000547517 EPPK1P58107 5090 aaKnown RBP8.34□□□□□ -1.08
RAB5C-204ENST00000547517 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 A0A1W2PRE2 83 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 K7EQM0 130 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 P0DMU3 169 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 TCL1AP56279 114 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 ZNF415Q09FC8 603 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 DAZ2Q13117 558 aaKnown RBP8.33□□□□□ -1.08
RAB5C-204ENST00000547517 IBA57Q5T440 356 aaKnown RBP8.33□□□□□ -1.08
RAB5C-204ENST00000547517 TMUB2Q71RG4 321 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 TVP23CQ96ET8 276 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 ATG101Q9BSB4 218 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 NDFIP1Q9BT67 221 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 EPDR1Q9UM22 224 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
RAB5C-204ENST00000547517 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
RAB5C-204ENST00000547517 TPT1P13693 172 aaKnown RBP8.32□□□□□ -1.08
RAB5C-204ENST00000547517 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
RAB5C-204ENST00000547517 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
RAB5C-204ENST00000547517 UBE2DNLQ8IWF7 75 aa8.32□□□□□ -1.08
RAB5C-204ENST00000547517 STOML3Q8TAV4 291 aa8.32□□□□□ -1.08
RAB5C-204ENST00000547517 TRGV2A0A075B6R0 118 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 TRAV21A0A0B4J279 112 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 A0A1B0GV50 99 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 FAM74A7A6NL05 159 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 UMAD1C9J7I0 102 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 FLI1Q01543 452 aaPredicted RBP8.31□□□□□ -1.08
RAB5C-204ENST00000547517 OR5I1Q13606 314 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 TMEM183BQ1AE95 376 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 TMEM183AQ8IXX5 376 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 TMEM75Q8N9X5 138 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 C8orf49Q96NF6 230 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 MRPL16Q9NX20 251 aaKnown RBP8.31□□□□□ -1.08
RAB5C-204ENST00000547517 PSG8Q9UQ74 426 aa8.31□□□□□ -1.08
RAB5C-204ENST00000547517 TRGV11A0A075B6L2 103 aa8.3□□□□□ -1.08
RAB5C-204ENST00000547517 TRAV34A0A0B4J273 112 aa8.3□□□□□ -1.08
RAB5C-204ENST00000547517 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
RAB5C-204ENST00000547517 PEX7O00628 323 aa8.3□□□□□ -1.08
RAB5C-204ENST00000547517 SPINK4O60575 86 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms