RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 RRN3P1Q2M238 152 aa14.95□□□□□ -0.02
SCARB1-211ENST00000546215 TREM1Q9NP99 234 aa14.95□□□□□ -0.02
SCARB1-211ENST00000546215 Q6ZQT7 251 aa14.94□□□□□ -0.02
SCARB1-211ENST00000546215 ZNF680Q8NEM1 530 aa14.94□□□□□ -0.02
SCARB1-211ENST00000546215 AZU1P20160 251 aa14.94□□□□□ -0.02
SCARB1-211ENST00000546215 PRNTQ86SH4 94 aa14.94□□□□□ -0.02
SCARB1-211ENST00000546215 KLF12Q9Y4X4 402 aa14.94□□□□□ -0.02
SCARB1-211ENST00000546215 CSMD3Q7Z407 3707 aa14.93□□□□□ -0.02
SCARB1-211ENST00000546215 LOC102723971A0A1B0GUV8 181 aa14.93□□□□□ -0.02
SCARB1-211ENST00000546215 HTN1P15515 57 aa14.93□□□□□ -0.02
SCARB1-211ENST00000546215 PYGO2Q9BRQ0 406 aa14.93□□□□□ -0.02
SCARB1-211ENST00000546215 SCO2A0A1W2PP80 73 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 IFNA1P01562 189 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 Q6AWC8 147 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 IL17DQ8TAD2 202 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 C2CD4CQ8TF44 421 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 TXNDC17Q9BRA2 123 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 NDFIP1Q9BT67 221 aa14.92□□□□□ -0.02
SCARB1-211ENST00000546215 TMEM189A5PLL7 270 aa14.91□□□□□ -0.02
SCARB1-211ENST00000546215 BCL2P10415 239 aa14.91□□□□□ -0.02
SCARB1-211ENST00000546215 FMC1Q96HJ9 113 aa14.91□□□□□ -0.02
SCARB1-211ENST00000546215 C8orf49Q96NF6 230 aa14.91□□□□□ -0.02
SCARB1-211ENST00000546215 MEF2BQ02080 365 aaPredicted RBP14.9□□□□□ -0.02
SCARB1-211ENST00000546215 TMEM183BQ1AE95 376 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 SAPCD1Q5SSQ6 148 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 Q86TA4 180 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 MUC7Q8TAX7 377 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 LINC00467Q9BRT7 94 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 PLAC8L1A1L4L8 177 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 AKR1C3P42330 323 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 EMP1P54849 157 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 RNASE8Q8TDE3 154 aaKnown RBP14.9□□□□□ -0.02
SCARB1-211ENST00000546215 VAX2Q9UIW0 290 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 CELA1Q9UNI1 258 aa14.9□□□□□ -0.02
SCARB1-211ENST00000546215 TRBV6-1A0A0K0K1D8 114 aa14.89□□□□□ -0.03
SCARB1-211ENST00000546215 TAGLN2P37802 199 aaKnown RBP14.89□□□□□ -0.03
SCARB1-211ENST00000546215 UBE2G1P62253 170 aa14.89□□□□□ -0.03
SCARB1-211ENST00000546215 C11orf45Q8TAV5 145 aa14.89□□□□□ -0.03
SCARB1-211ENST00000546215 TMEM263Q8WUH6 116 aaKnown RBP14.89□□□□□ -0.03
SCARB1-211ENST00000546215 C11orf52Q96A22 123 aa14.89□□□□□ -0.03
SCARB1-211ENST00000546215 ZNF80P51504 273 aaPredicted RBP14.88□□□□□ -0.03
SCARB1-211ENST00000546215 SMUG1Q53HV7 270 aa14.88□□□□□ -0.03
SCARB1-211ENST00000546215 ZNF493Q6ZR52 646 aa14.88□□□□□ -0.03
SCARB1-211ENST00000546215 C16orf74Q96GX8 76 aa14.88□□□□□ -0.03
SCARB1-211ENST00000546215 ZFP30Q9Y2G7 519 aa14.88□□□□□ -0.03
SCARB1-211ENST00000546215 STARD9Q9P2P6 4700 aa14.88□□□□□ -0.03
SCARB1-211ENST00000546215 IGHV1OR15-1A0A075B7D0 117 aa14.87□□□□□ -0.03
SCARB1-211ENST00000546215 TRAV21A0A0B4J279 112 aa14.87□□□□□ -0.03
SCARB1-211ENST00000546215 GCGP01275 180 aa14.87□□□□□ -0.03
SCARB1-211ENST00000546215 S100A9P06702 114 aaKnown RBP14.87□□□□□ -0.03
SCARB1-211ENST00000546215 EIF4E3Q8N5X7 224 aaKnown RBP14.87□□□□□ -0.03
SCARB1-211ENST00000546215 PCNPQ8WW12 178 aaKnown RBP14.87□□□□□ -0.03
SCARB1-211ENST00000546215 DKK2Q9UBU2 259 aa14.87□□□□□ -0.03
SCARB1-211ENST00000546215 RGS13O14921 159 aa14.86□□□□□ -0.03
SCARB1-211ENST00000546215 PDE6DO43924 150 aa14.86□□□□□ -0.03
SCARB1-211ENST00000546215 LTAP01374 205 aa14.86□□□□□ -0.03
SCARB1-211ENST00000546215 NANOS2P60321 138 aaKnown RBP14.86□□□□□ -0.03
SCARB1-211ENST00000546215 ANXA2RQ3ZCQ2 193 aa14.86□□□□□ -0.03
SCARB1-211ENST00000546215 COX8CQ7Z4L0 72 aa14.86□□□□□ -0.03
SCARB1-211ENST00000546215 CXorf65A6NEN9 183 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 MUC21Q5SSG8 566 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 FAM222AQ5U5X8 452 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 DYNC2H1Q8NCM8 4307 aaKnown RBP14.85□□□□□ -0.03
SCARB1-211ENST00000546215 RBFOX3A6NFN3 312 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 CBY3A6NI87 242 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 SPART-AS1P0CW21 52 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 DERL1Q9BUN8 251 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 TP53TG3Q9ULZ0 132 aa14.85□□□□□ -0.03
SCARB1-211ENST00000546215 PFN1P07737 140 aaKnown RBP14.84□□□□□ -0.03
SCARB1-211ENST00000546215 RPL35P42766 123 aaKnown RBP14.84□□□□□ -0.03
SCARB1-211ENST00000546215 C11orf72Q8NBR9 251 aa14.84□□□□□ -0.03
SCARB1-211ENST00000546215 C3orf84H3BNL1 204 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 C12orf74Q32Q52 190 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 TDRG1Q3Y452 100 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 ZNF506Q5JVG8 444 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 FAM159AQ6UWV7 190 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 TMEM183AQ8IXX5 376 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 ZC2HC1AQ96GY0 325 aa14.83□□□□□ -0.04
SCARB1-211ENST00000546215 TIMM8BQ9Y5J9 83 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-211ENST00000546215 LYRM9A8MSI8 78 aa14.82□□□□□ -0.04
SCARB1-211ENST00000546215 CRIP1P50238 77 aa14.82□□□□□ -0.04
SCARB1-211ENST00000546215 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
SCARB1-211ENST00000546215 MLST8Q9BVC4 326 aa14.82□□□□□ -0.04
SCARB1-211ENST00000546215 C11orf21Q9P2W6 132 aa14.82□□□□□ -0.04
SCARB1-211ENST00000546215 NAGKQ9UJ70 344 aa14.82□□□□□ -0.04
SCARB1-211ENST00000546215 TEX48A0A1B0GUV7 120 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 ZFAND6Q6FIF0 208 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 ZNF767PQ75MW2 155 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 BAGE2Q86Y30 109 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 NOP10Q9NPE3 64 aaKnown RBP14.81□□□□□ -0.04
SCARB1-211ENST00000546215 GSN-AS1Q9NRJ2 163 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 MED9Q9NWA0 146 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 TOR2AQ5JU69 321 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 IBA57Q5T440 356 aaKnown RBP14.81□□□□□ -0.04
SCARB1-211ENST00000546215 Q6ZTC4 211 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 NHLRC2Q8NBF2 726 aa14.81□□□□□ -0.04
SCARB1-211ENST00000546215 FABP5P3A8MUU1 101 aa14.8□□□□□ -0.04
SCARB1-211ENST00000546215 SNURFLB1AK76 121 aa14.8□□□□□ -0.04
SCARB1-211ENST00000546215 DAZ2Q13117 558 aaKnown RBP14.8□□□□□ -0.04
SCARB1-211ENST00000546215 CASC10Q5T4H9 136 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms