RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 OR8A1Q8NGG7 326 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 FRZBQ92765 325 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 RPUSD4Q96CM3 377 aaKnown RBP7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 RARRES2Q99969 163 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 SDF2L1Q9HCN8 221 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 PGPA6NDG6 321 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 FRMD6-AS1P0C7T7 363 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 GZMBP10144 247 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 UBE2G2P60604 165 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 ZNF738Q8NE65 137 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 CLUHP3Q96NS8 147 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 IMMP2LQ96T52 175 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 CLEC5AQ9NY25 188 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 CBY1Q9Y3M2 126 aa7.83□□□□□ -1.16
NPIPB3-210ENST00000542817 TGIF2-C20orf24A0A0A6YYL0 155 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 ZNF727A8MUV8 499 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 DIRC3C9JPN6 131 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 PAGE4O60829 102 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 FABP4P15090 132 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 ATP5G3P48201 142 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 CNN1P51911 297 aaKnown RBP7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 GNG5P63218 68 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 ERCC8Q13216 396 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 CDPF1Q6NVV7 123 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 ZNF664Q8N3J9 261 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 ARL6IP6Q8N6S5 226 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 FAM19A4Q96LR4 140 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 VGLL1Q99990 258 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 AGPAT4-IT1Q9H0P7 198 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 ARL2-SNX15V9GYD0 113 aa7.82□□□□□ -1.16
NPIPB3-210ENST00000542817 IGKV2-40A0A087WW87 121 aaPredicted RBP7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 IGKV2D-40P01614 121 aaPredicted RBP7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 IGLV2-11P01706 119 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 TYMSP04818 313 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 CT45A10P0DMU9 189 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 ERVFC1-1P60608 527 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 KIR3DS1Q14943 382 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 CYB561D1Q8N8Q1 229 aa7.81□□□□□ -1.16
NPIPB3-210ENST00000542817 M0R143 59 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 CRXO43186 299 aaPredicted RBP7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 IFNA1P01562 189 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 AMBPP02760 352 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 TCRAP04437 139 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 LINC00614P0C842 121 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 RPL35AP18077 110 aaKnown RBP7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 FAM3BP58499 235 aaPredicted RBP7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 HIST1H1AQ02539 215 aaPredicted RBP7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 GFI1BQ5VTD9 330 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 C9orf47Q6ZRZ4 202 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 SBSPONQ8IVN8 264 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 CSNK1G2-AS1Q8NCQ2 148 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 TMEM18Q96B42 140 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 ANAPC16Q96DE5 110 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 LINC00479Q96M42 142 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 ASCL2Q99929 193 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 AAMDCQ9H7C9 122 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 GNG13Q9P2W3 67 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
NPIPB3-210ENST00000542817 LOC102724200A0A096LPH7 203 aaPredicted RBP7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 TMEM250H0YL14 139 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 IGKV3-20P01619 116 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 BCL2P10415 239 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 GOLT1AQ6ZVE7 132 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 STHQ8IWL8 128 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 MRAPQ8TCY5 172 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 NAT8Q9UHE5 227 aa7.79□□□□□ -1.16
NPIPB3-210ENST00000542817 RBAKDNA6NC62 111 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 SLC25A5P05141 298 aaKnown RBP7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 RBMY1A1P0DJD3 496 aaKnown RBP7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 RBMY1CP0DJD4 496 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 RBMY1FQ15415 496 aaKnown RBP7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 TMEM241Q24JQ0 296 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 DEFB121Q5J5C9 76 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 PRR9Q5T870 116 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 EBLN2Q6P2I7 272 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 ZFAND2AQ8N6M9 145 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 OR4B1Q8NGF8 309 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 Q8TAT8 98 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 SGK494Q96LW2 274 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 PRO1933Q9H354 126 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 MANBALQ9NQG1 85 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 ZNF492Q9P255 531 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 KLF12Q9Y4X4 402 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 CSMD3Q7Z407 3707 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 STARD9Q9P2P6 4700 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 KIR2DL5BA0A0G2JN68 375 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 KIR2DL5BA0A0G2JPC4 375 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 C11orf94C9JXX5 98 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms