RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 C20orf203Q8NBC4 194 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR51A4Q8NGJ6 313 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR4D5Q8NGN0 318 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 LRRC20Q8TCA0 184 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 PYURFQ96I23 114 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 PGLYRP3Q96LB9 341 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 LINC00477Q96M19 166 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 GPR82Q96P67 336 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 ODF3Q96PU9 254 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 GINS4Q9BRT9 223 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 CHCHD5Q9BSY4 110 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 BANF2Q9H503 90 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 NINJ2Q9NZG7 142 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 MRPL36Q9P0J6 103 aaKnown RBP0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 DAPK2Q9UIK4 370 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 PRNDQ9UKY0 176 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 SSR3Q9UNL2 185 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 ARL2BPQ9Y2Y0 163 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGHV3-73A0A0B4J1V6 119 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 RBAKDNA6NC62 111 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 C5orf51A6NDU8 294 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 FAM24AA6NFZ4 105 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 UBDO15205 165 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 FABP7O15540 132 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 TNFSF12O43508 249 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 TSC22D2O75157 780 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 ZNF253O75346 499 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 CRTAPO75718 401 aaPredicted RBP0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 DIRAS3O95661 229 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 GPX1P07203 203 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 CXCL3P19876 107 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 PSMA1P25786 263 aaKnown RBP0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 S100A7P31151 101 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 RNASE4P34096 147 aaKnown RBP0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 CBX5P45973 191 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 GZMMP51124 257 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 PIGPP57054 158 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 BAK1Q16611 211 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMUB2Q71RG4 321 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 C6orf201Q7Z4U5 140 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC35F2Q8IXU6 374 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 C3orf22Q8N5N4 141 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 BPIFB6Q8NFQ5 453 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR2G3Q8NGZ4 309 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 GPR148Q8TDV2 347 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 ISOC2Q96AB3 205 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 SH3GL1Q99961 368 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 PARLQ9H300 379 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC25A22Q9H936 323 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 PLEKHJ1Q9NW61 149 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 CLN6Q9NWW5 311 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 TAS2R8Q9NYW2 309 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 PHLDA3Q9Y5J5 127 aa0.94□□□□□ -2.26
TRAV1-1-201ENST00000542354 TRBV6-8A0A0A6YYG3 113 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 TRPC5OSA6NMA1 111 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 SNRPGP15A8MWD9 76 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 FNDC10F2Z333 226 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 G3V2T6 193 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 H3BN98 237 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 M0QXV9 152 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC17A3O00476 420 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 NDUFAB1O14561 156 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 MRPS12O15235 138 aaKnown RBP0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 APOMO95445 188 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 HMGN1P05114 100 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 LINC00694P0DN24 101 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC25A4P12235 298 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 RRM2P31350 389 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 RND2P52198 227 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 RBX1P62877 108 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 PPP3R1P63098 170 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 TRAM1Q15629 374 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 RAB11BQ15907 218 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 Q499Y3 187 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 CFAP126Q5VTH2 177 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 GLIPR1L1Q6UWM5 242 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 ATP11AUNQ6ZP68 121 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 FAM19A5Q7Z5A7 132 aaPredicted RBP0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 DHRSXQ8N5I4 330 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR10G7Q8NGN6 311 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 TEX47Q8TBZ9 253 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 DTD1Q8TEA8 209 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 PHYHIPLQ96FC7 376 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 TSC22D3Q99576 134 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 CIB1Q99828 191 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 C12orf4Q9NQ89 552 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 IFT46Q9NQC8 304 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 CCDC167Q9P0B6 97 aa0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 UTP11Q9Y3A2 253 aaKnown RBP0.93□□□□□ -2.26
TRAV1-1-201ENST00000542354 A0A0A6YYH2 397 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 A0A0G2JQZ4 141 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 LINC00854A0A1B0GVQ3 168 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 A6NJ64 397 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 GPR31O00270 319 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 CTDSPLO15194 276 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 BCE1O60756 84 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 DIRAS1O95057 198 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 HLA-DQB1P01920 261 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 CD2P06729 351 aa0.92□□□□□ -2.26
TRAV1-1-201ENST00000542354 FABP1P07148 127 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms