RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 Q8TAT8 98 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 DAZAP1Q96EP5 407 aaKnown RBP4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 LINC00477Q96M19 166 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 ASCL2Q99929 193 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 GPR61Q9BZJ8 451 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 AGPAT4-IT1Q9H0P7 198 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 SDF2L1Q9HCN8 221 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 ZFP30Q9Y2G7 519 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 ZNF256Q9Y2P7 627 aaPredicted RBP4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 TRBV20OR9-2A0A075B6H5 130 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 TRBV6-1A0A0K0K1D8 114 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 KNCNA6PVL3 124 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 J3KRW8 73 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 LTAP01374 205 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 IGLV2-11P01706 119 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 MT-ND4LP03901 98 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 CT45A10P0DMU9 189 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 ERVFC1-1P60608 527 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 RPL23P62829 140 aaKnown RBP4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 PRR27Q6MZM9 219 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 FOXI2Q6ZQN5 318 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 Q86TA4 180 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 LINC01551Q86U37 167 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 GTSCR1Q86UQ5 136 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 APRG1Q8IVJ8 170 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 TMEM183AQ8IXX5 376 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 IGF2BP2-AS1Q96M15 143 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 PRR25Q96S07 402 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 SAV1Q9H4B6 383 aaPredicted RBP4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 MAP6D1Q9H9H5 199 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 RPS10P5Q9NQ39 176 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 BIN3Q9NQY0 253 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 LY96Q9Y6Y9 160 aa4.94□□□□□ -1.62
CLTCL1-206ENST00000540896 A0A0J9YX75 114 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 C7orf77A4D0Y5 90 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 B4DEV8 164 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 GPX1P07203 203 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 CD7P09564 240 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 OR5I1Q13606 314 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 SMUG1Q53HV7 270 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 GDF5OSQ5U4N7 250 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 STHQ8IWL8 128 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 C15orf54Q8N8G6 183 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 CLRN3Q8NCR9 226 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 SMIM12Q96EX1 92 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 ZNF492Q9P255 531 aa4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 ZMAT5Q9UDW3 170 aaKnown RBP4.93□□□□□ -1.62
CLTCL1-206ENST00000540896 H7BYZ3 331 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 K7EN84 100 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 GCGP01275 180 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 IGLV2-8P01709 118 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 P01737 135 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 TSPOP30536 169 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 RNASE4P34096 147 aaKnown RBP4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 LEPP41159 167 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 NUTF2P61970 127 aaKnown RBP4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 RHEBQ15382 184 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 ODF3L2Q3SX64 289 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 IBA57Q5T440 356 aaKnown RBP4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 FAM162BQ5T6X4 162 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 OR10G8Q8NGN5 311 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 ISOC2Q96AB3 205 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 ZC2HC1AQ96GY0 325 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 SFRP2Q96HF1 295 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 MLST8Q9BVC4 326 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 X6R8D5 127 aa4.92□□□□□ -1.62
CLTCL1-206ENST00000540896 NOTCH3Q9UM47 2321 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 FABP5P3A8MUU1 101 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 ZNF705GA8MUZ8 300 aaPredicted RBP4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 H3BMM0 161 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 PPP1R2P9O14990 202 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 GATCO43716 136 aaKnown RBP4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 ORM1P02763 201 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 HLA-DRB4P13762 266 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 FXYD7P58549 80 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 RNF212Q495C1 297 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 ATRAIDQ6UW56 229 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 DEFB125Q8N687 156 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 NUDT10Q8NFP7 164 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 NUDT11Q96G61 164 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 KRTAP17-1Q9BYP8 105 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 CTDSP1Q9GZU7 261 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 RNASE7Q9H1E1 156 aaKnown RBP4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 TUBA4BQ9H853 241 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 HLA-DRB4X5D2U9 266 aa4.91□□□□□ -1.62
CLTCL1-206ENST00000540896 TGP01266 2768 aa4.9□□□□□ -1.62
CLTCL1-206ENST00000540896 TRAV12-2A0A075B6T6 113 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 TMSB15BA0A087X1C1 80 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 TRAV12-3A0A0B4J271 114 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 TRBV7-9A0A0J9YWB2 115 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 TMEM189A5PLL7 270 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 G3V4G9 280 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 ZNF561-AS1K7EIQ3 104 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms