RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 TREM1Q9NP99 234 aa10.75□□□□□ -0.69
MDM1-210ENST00000540418 TRAV34A0A0B4J273 112 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 PRM2P04554 102 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 HTN1P15515 57 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 LOC102723971A0A1B0GUV8 181 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 IFNA1P01562 189 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 LYPD6BQ8NI32 183 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 TXNDC17Q9BRA2 123 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 KLF12Q9Y4X4 402 aa10.74□□□□□ -0.69
MDM1-210ENST00000540418 SAPCD1Q5SSQ6 148 aa10.73□□□□□ -0.69
MDM1-210ENST00000540418 AZU1P20160 251 aa10.73□□□□□ -0.69
MDM1-210ENST00000540418 ZNF680Q8NEM1 530 aa10.73□□□□□ -0.69
MDM1-210ENST00000540418 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
MDM1-210ENST00000540418 Q6AWC8 147 aa10.72□□□□□ -0.69
MDM1-210ENST00000540418 MUC7Q8TAX7 377 aa10.72□□□□□ -0.69
MDM1-210ENST00000540418 LINC00467Q9BRT7 94 aa10.72□□□□□ -0.69
MDM1-210ENST00000540418 TAGLN2P37802 199 aaKnown RBP10.72□□□□□ -0.69
MDM1-210ENST00000540418 EMP1P54849 157 aa10.72□□□□□ -0.69
MDM1-210ENST00000540418 Q6ZQT7 251 aa10.72□□□□□ -0.69
MDM1-210ENST00000540418 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
MDM1-210ENST00000540418 TRBV6-1A0A0K0K1D8 114 aa10.71□□□□□ -0.69
MDM1-210ENST00000540418 SCO2A0A1W2PP80 73 aa10.71□□□□□ -0.69
MDM1-210ENST00000540418 UBE2G1P62253 170 aa10.71□□□□□ -0.69
MDM1-210ENST00000540418 ZNF493Q6ZR52 646 aa10.71□□□□□ -0.69
MDM1-210ENST00000540418 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
MDM1-210ENST00000540418 S100A9P06702 114 aaKnown RBP10.71□□□□□ -0.7
MDM1-210ENST00000540418 BCL2P10415 239 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 AKR1C3P42330 323 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 MEF2BQ02080 365 aaPredicted RBP10.71□□□□□ -0.7
MDM1-210ENST00000540418 TMEM183BQ1AE95 376 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 C2CD4CQ8TF44 421 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 C16orf74Q96GX8 76 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 C8orf49Q96NF6 230 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 ZFP30Q9Y2G7 519 aa10.71□□□□□ -0.7
MDM1-210ENST00000540418 RGS13O14921 159 aa10.7□□□□□ -0.7
MDM1-210ENST00000540418 SMUG1Q53HV7 270 aa10.7□□□□□ -0.7
MDM1-210ENST00000540418 Q86TA4 180 aa10.7□□□□□ -0.7
MDM1-210ENST00000540418 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
MDM1-210ENST00000540418 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
MDM1-210ENST00000540418 CXorf65A6NEN9 183 aa10.69□□□□□ -0.7
MDM1-210ENST00000540418 SPART-AS1P0CW21 52 aa10.69□□□□□ -0.7
MDM1-210ENST00000540418 EIF4E3Q8N5X7 224 aaKnown RBP10.69□□□□□ -0.7
MDM1-210ENST00000540418 RNASE8Q8TDE3 154 aaKnown RBP10.69□□□□□ -0.7
MDM1-210ENST00000540418 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
MDM1-210ENST00000540418 PDE6DO43924 150 aa10.69□□□□□ -0.7
MDM1-210ENST00000540418 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
MDM1-210ENST00000540418 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 CBY3A6NI87 242 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 C3orf84H3BNL1 204 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
MDM1-210ENST00000540418 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 DKK2Q9UBU2 259 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 CELA1Q9UNI1 258 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 LTAP01374 205 aa10.68□□□□□ -0.7
MDM1-210ENST00000540418 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
MDM1-210ENST00000540418 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 RBFOX3A6NFN3 312 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 GCGP01275 180 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 FAM159AQ6UWV7 190 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 COX8CQ7Z4L0 72 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
MDM1-210ENST00000540418 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
MDM1-210ENST00000540418 PFN1P07737 140 aaKnown RBP10.66□□□□□ -0.7
MDM1-210ENST00000540418 LYRM9A8MSI8 78 aa10.66□□□□□ -0.7
MDM1-210ENST00000540418 RPL35P42766 123 aaKnown RBP10.66□□□□□ -0.7
MDM1-210ENST00000540418 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
MDM1-210ENST00000540418 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
MDM1-210ENST00000540418 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
MDM1-210ENST00000540418 ZNF506Q5JVG8 444 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 TMEM183AQ8IXX5 376 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 MED9Q9NWA0 146 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 NAGKQ9UJ70 344 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 IBA57Q5T440 356 aaKnown RBP10.65□□□□□ -0.7
MDM1-210ENST00000540418 ZFAND6Q6FIF0 208 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
MDM1-210ENST00000540418 ZC2HC1AQ96GY0 325 aa10.65□□□□□ -0.7
MDM1-210ENST00000540418 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
MDM1-210ENST00000540418 KCNS1Q96KK3 526 aa10.64□□□□□ -0.71
MDM1-210ENST00000540418 DERL1Q9BUN8 251 aa10.64□□□□□ -0.71
MDM1-210ENST00000540418 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
MDM1-210ENST00000540418 DAZ2Q13117 558 aaKnown RBP10.64□□□□□ -0.71
MDM1-210ENST00000540418 CASC10Q5T4H9 136 aa10.64□□□□□ -0.71
MDM1-210ENST00000540418 ZNF767PQ75MW2 155 aa10.64□□□□□ -0.71
MDM1-210ENST00000540418 FAM210AQ96ND0 272 aa10.64□□□□□ -0.71
MDM1-210ENST00000540418 EIF5A2Q9GZV4 153 aaKnown RBP10.64□□□□□ -0.71
MDM1-210ENST00000540418 CRIP1P50238 77 aa10.63□□□□□ -0.71
MDM1-210ENST00000540418 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
MDM1-210ENST00000540418 MLST8Q9BVC4 326 aa10.63□□□□□ -0.71
MDM1-210ENST00000540418 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
MDM1-210ENST00000540418 Q6ZTC4 211 aa10.63□□□□□ -0.71
MDM1-210ENST00000540418 SDF2L1Q9HCN8 221 aa10.63□□□□□ -0.71
MDM1-210ENST00000540418 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms