RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 TP53TG3Q9ULZ0 132 aa13.5□□□□□ -0.25
RAP1B-221ENST00000540209 LINC00588Q9Y4M8 146 aa13.5□□□□□ -0.25
RAP1B-221ENST00000540209 KLF12Q9Y4X4 402 aa13.5□□□□□ -0.25
RAP1B-221ENST00000540209 LENEPQ9Y5L5 61 aa13.5□□□□□ -0.25
RAP1B-221ENST00000540209 PRSS29PA6NIE9 313 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 H3BNG1 76 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 SPINK4O60575 86 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 GIPP09681 153 aaPredicted RBP13.49□□□□□ -0.25
RAP1B-221ENST00000540209 HSD17B11Q8NBQ5 300 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 TMED6Q8WW62 240 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 ASB13Q8WXK3 278 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 PSMG3Q9BT73 122 aaPredicted RBP13.49□□□□□ -0.25
RAP1B-221ENST00000540209 MUC4Q99102 2169 aa13.49□□□□□ -0.25
RAP1B-221ENST00000540209 TRGV2A0A075B6R0 118 aa13.48□□□□□ -0.25
RAP1B-221ENST00000540209 A0A0J9YY99 117 aa13.48□□□□□ -0.25
RAP1B-221ENST00000540209 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
RAP1B-221ENST00000540209 RYR1P21817 5038 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 PGPA6NDG6 321 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
RAP1B-221ENST00000540209 ATP6V0CP27449 155 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 FAM74A1Q5RGS3 127 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 Q6AWC8 147 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 ARL6IP6Q8N6S5 226 aa13.47□□□□□ -0.25
RAP1B-221ENST00000540209 DYNC1H1Q14204 4646 aaKnown RBP13.46□□□□□ -0.25
RAP1B-221ENST00000540209 STAG3L2P0CL84 134 aa13.46□□□□□ -0.25
RAP1B-221ENST00000540209 STAG3L3P0CL85 134 aa13.46□□□□□ -0.25
RAP1B-221ENST00000540209 ARL14EPLP0DKL9 152 aa13.46□□□□□ -0.25
RAP1B-221ENST00000540209 CDC34P49427 236 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-221ENST00000540209 SSX7Q7RTT5 188 aa13.46□□□□□ -0.25
RAP1B-221ENST00000540209 CMTM2Q8TAZ6 248 aa13.46□□□□□ -0.25
RAP1B-221ENST00000540209 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
RAP1B-221ENST00000540209 NBDYA0A0U1RRE5 68 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 RNF222A6NCQ9 220 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 SERF2P84101 59 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 SOHLH1Q5JUK2 328 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 VSIG2Q96IQ7 327 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 RPH3ALQ9UNE2 315 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 DNAH11Q96DT5 4516 aa13.45□□□□□ -0.26
RAP1B-221ENST00000540209 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 MUC21Q5SSG8 566 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 GOLT1AQ6ZVE7 132 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 SUN5Q8TC36 379 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 ST6GAL2Q96JF0 529 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 SH3BGRL3Q9H299 93 aa13.44□□□□□ -0.26
RAP1B-221ENST00000540209 MRPL16Q9NX20 251 aaKnown RBP13.44□□□□□ -0.26
RAP1B-221ENST00000540209 MBP02144 154 aa13.43□□□□□ -0.26
RAP1B-221ENST00000540209 INO80EQ8NBZ0 244 aaPredicted RBP13.43□□□□□ -0.26
RAP1B-221ENST00000540209 TNFSF18Q9UNG2 199 aa13.43□□□□□ -0.26
RAP1B-221ENST00000540209 TRAV8-1A0A0A6YYK1 113 aa13.42□□□□□ -0.26
RAP1B-221ENST00000540209 ESRGQ1W209 222 aa13.42□□□□□ -0.26
RAP1B-221ENST00000540209 TDRG1Q3Y452 100 aa13.42□□□□□ -0.26
RAP1B-221ENST00000540209 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
RAP1B-221ENST00000540209 FXYD6-FXYD2A0A087WZ82 144 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 A0A096LPF7 62 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 G3V3Q6 166 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 GCHFRP30047 84 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 GNG5P63218 68 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 RGS21Q2M5E4 152 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 FAM159AQ6UWV7 190 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 OR2T35Q8NGX2 323 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 TVP23CQ96ET8 276 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 UPK3BQ9BT76 320 aa13.41□□□□□ -0.26
RAP1B-221ENST00000540209 TMEM183BQ1AE95 376 aa13.4□□□□□ -0.26
RAP1B-221ENST00000540209 RPL7L1Q6DKI1 246 aaKnown RBP13.4□□□□□ -0.26
RAP1B-221ENST00000540209 TMEM183AQ8IXX5 376 aa13.4□□□□□ -0.26
RAP1B-221ENST00000540209 Q9H8V8 135 aa13.4□□□□□ -0.26
RAP1B-221ENST00000540209 TRGV11A0A075B6L2 103 aa13.39□□□□□ -0.27
RAP1B-221ENST00000540209 SERTM2A0A1B0GWG4 89 aa13.39□□□□□ -0.27
RAP1B-221ENST00000540209 IGHV3-53P01767 116 aa13.39□□□□□ -0.27
RAP1B-221ENST00000540209 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
RAP1B-221ENST00000540209 TREM1Q9NP99 234 aa13.39□□□□□ -0.27
RAP1B-221ENST00000540209 MRPS16Q9Y3D3 137 aaKnown RBP13.39□□□□□ -0.27
RAP1B-221ENST00000540209 BORCS7-ASMTA0A0B4J1R7 106 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 F6UZH7 168 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 CXorf1O96002 111 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 TCRAP04437 139 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 RASL10AQ92737 203 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 SPXQ9BT56 116 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 ACTR3CQ9C0K3 210 aaPredicted RBP13.38□□□□□ -0.27
RAP1B-221ENST00000540209 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 PRO0255Q9UI72 69 aa13.38□□□□□ -0.27
RAP1B-221ENST00000540209 TRAV21A0A0B4J279 112 aa13.37□□□□□ -0.27
RAP1B-221ENST00000540209 GGTLC3B5MD39 225 aa13.37□□□□□ -0.27
RAP1B-221ENST00000540209 FHL2Q14192 279 aa13.37□□□□□ -0.27
RAP1B-221ENST00000540209 KRTAP1-5Q9BYS1 174 aa13.37□□□□□ -0.27
RAP1B-221ENST00000540209 NAGKQ9UJ70 344 aa13.37□□□□□ -0.27
RAP1B-221ENST00000540209 PAX4O43316 350 aa13.36□□□□□ -0.27
RAP1B-221ENST00000540209 CRYBA4P53673 196 aa13.36□□□□□ -0.27
RAP1B-221ENST00000540209 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
RAP1B-221ENST00000540209 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
RAP1B-221ENST00000540209 ICOSQ9Y6W8 199 aa13.36□□□□□ -0.27
RAP1B-221ENST00000540209 IGHV3-16A0A0C4DH30 117 aa13.35□□□□□ -0.27
RAP1B-221ENST00000540209 GNRH2O43555 120 aa13.35□□□□□ -0.27
RAP1B-221ENST00000540209 IGLV2-11P01706 119 aa13.35□□□□□ -0.27
RAP1B-221ENST00000540209 SUMO1P63165 101 aaKnown RBP13.35□□□□□ -0.27
RAP1B-221ENST00000540209 SLAQ13239 276 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms