RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MGLLQ99685 303 aa2.57□□□□□ -2
AC055720.1-201ENST00000539552 ZNF586Q9NXT0 402 aa2.57□□□□□ -2
AC055720.1-201ENST00000539552 C21orf62Q9NYP8 219 aa2.57□□□□□ -2
AC055720.1-201ENST00000539552 BAIAP2Q9UQB8 552 aa2.57□□□□□ -2
AC055720.1-201ENST00000539552 PHLDA3Q9Y5J5 127 aa2.57□□□□□ -2
AC055720.1-201ENST00000539552 RAI1Q7Z5J4 1906 aaPredicted RBP2.57□□□□□ -2
AC055720.1-201ENST00000539552 TRIP11Q15643 1979 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 TRAV30A0A087WSZ9 112 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 IGHV3-64DA0A0J9YX35 117 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 LOC100130705A0A1B0GUX0 176 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 TMEM223A0PJW6 202 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 TMEM218A2RU14 115 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 H3BMG7 143 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 C1QAP02745 245 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 CGB3P0DN86 165 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 CGB7P0DN87 165 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 IGHV3-30-3P0DP02 117 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 CRYGSP22914 178 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 CRYBB3P26998 211 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 SRP14P37108 136 aaKnown RBP2.56□□□□□ -2
AC055720.1-201ENST00000539552 GNG4P50150 75 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 KRTAP10-3P60369 221 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 EIF5AP63241 154 aaKnown RBP2.56□□□□□ -2
AC055720.1-201ENST00000539552 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
AC055720.1-201ENST00000539552 LINC01554Q52M75 96 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 ZNF880Q6PDB4 577 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 APCDD1LQ8NCL9 501 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 OR5A2Q8NGI9 324 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 STAG3L4Q8TBR4 150 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 CIRBP-AS1Q8TBR5 109 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 PP6455Q8WZ26 134 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 OR4C12Q96R67 309 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 TMEM191AQ9H0A3 160 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 XAGE1AQ9HD64 81 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 SOX21Q9Y651 276 aaPredicted RBP2.56□□□□□ -2
AC055720.1-201ENST00000539552 SEC16AO15027 2179 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 CACNA1CQ13936 2221 aa2.56□□□□□ -2
AC055720.1-201ENST00000539552 IGLV3-10A0A075B6K4 115 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 TRAV13-1A0A0B4J241 112 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 KLF18A0A0U1RQI7 1052 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 A0A1W2PNU3 283 aaPredicted RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 C1orf196B1AJZ1 125 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 ZNF670-ZNF695F2Z2N8 137 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 TMEM256-PLSCR3K7ERE1 68 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 UBFD1O14562 309 aaKnown RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 CCL25O15444 150 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 NAPSAO96009 420 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 SOD1P00441 154 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 IGHV1-46P01743 117 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 ZNF883P0CG24 379 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 AKAIN1P0CW23 69 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 FABP2P12104 132 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 GUCA1AP43080 201 aaPredicted RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 RP1P56715 2156 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 RBM11P57052 281 aaKnown RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 HIST1H4AP62805 103 aaKnown RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 IGLV3-21P80748 117 aaPredicted RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 QRFPP83859 136 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 RPL18Q07020 188 aaKnown RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 SYCNQ0VAF6 134 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 SPANXN3Q5MJ09 141 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 LDLRAD2Q5SZI1 272 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 SPATA12Q7Z6I5 190 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 TRAPPC6BQ86SZ2 158 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 IFT20Q8IY31 132 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 ZFP62Q8NB50 900 aaPredicted RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 OR8D4Q8NGM9 314 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 TYMSOSQ8TAI1 123 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 YPEL2Q96QA6 119 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 MRPL32Q9BYC8 188 aaKnown RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 C11orf1Q9H5F2 150 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 SLC39A9Q9NUM3 307 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 ZNRD1Q9P1U0 126 aa2.55□□□□□ -2
AC055720.1-201ENST00000539552 BOKQ9UMX3 212 aaPredicted RBP2.55□□□□□ -2
AC055720.1-201ENST00000539552 SCN2AQ99250 2005 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 A0A087X0T9 212 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 IGKV3D-20A0A0C4DH25 116 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 A0A1W2PP18 115 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 ODAMA1E959 279 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 CD28P10747 220 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 TGFBR1P36897 503 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 RPL27AP46776 148 aaKnown RBP2.54□□□□□ -2
AC055720.1-201ENST00000539552 NOVP48745 357 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 DYNLT3P51808 116 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 AQP4P55087 323 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 UBE2BP63146 152 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 HBBP68871 147 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 IL17AQ16552 155 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 C14orf177Q52M58 125 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 GTSCR1Q86UQ5 136 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 OR10AC1Q8NH08 325 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 BRK1Q8WUW1 75 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 NAT14Q8WUY8 206 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 SFT2D1Q8WV19 159 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 FGF13Q92913 245 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 SLC25A46Q96AG3 418 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 SDF2Q99470 211 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms