RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ZFP92A6NM28 416 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 INS-IGF2F8WCM5 200 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 M0R036 132 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 OPRK1P41145 380 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 FGF8P55075 233 aaPredicted RBP6.21□□□□□ -1.41
USP28-205ENST00000537706 ERHP84090 104 aaKnown RBP6.21□□□□□ -1.41
USP28-205ENST00000537706 BSXQ3C1V8 233 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 SIGLEC15Q6ZMC9 328 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 MANBALQ9NQG1 85 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 SLC39A9Q9NUM3 307 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 VAX2Q9UIW0 290 aa6.21□□□□□ -1.41
USP28-205ENST00000537706 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 C7orf77A4D0Y5 90 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 CDC34P49427 236 aaPredicted RBP6.21□□□□□ -1.42
USP28-205ENST00000537706 C2orf83Q53S99 150 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 GDF5OSQ5U4N7 250 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 C15orf54Q8N8G6 183 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 C16orf74Q96GX8 76 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 MGST2Q99735 147 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 RPS10P5Q9NQ39 176 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 LY96Q9Y6Y9 160 aa6.21□□□□□ -1.42
USP28-205ENST00000537706 TRAV30A0A087WSZ9 112 aa6.2□□□□□ -1.42
USP28-205ENST00000537706 H3BQ15 152 aa6.2□□□□□ -1.42
USP28-205ENST00000537706 EVI2AP22794 236 aa6.2□□□□□ -1.42
USP28-205ENST00000537706 FAM122CQ6P4D5 195 aa6.2□□□□□ -1.42
USP28-205ENST00000537706 RAB24Q969Q5 203 aa6.2□□□□□ -1.42
USP28-205ENST00000537706 A0A087WWC5 75 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 CORTO00230 105 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 PSMB3P49720 205 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 MEF2BQ02080 365 aaPredicted RBP6.19□□□□□ -1.42
USP28-205ENST00000537706 RAB31Q13636 194 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 TEPPQ6URK8 271 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 Q6ZSA8 131 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 Q8N814 137 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 Q8WTZ3 238 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 NPVFQ9HCQ7 196 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 PXMP4Q9Y6I8 212 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 U3KQE9 123 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 TRAV5A0A0B4J249 113 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 TMEM250H0YL14 139 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 RNASE2P10153 161 aaKnown RBP6.19□□□□□ -1.42
USP28-205ENST00000537706 CEBPGP53567 150 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 FLI1Q01543 452 aaPredicted RBP6.19□□□□□ -1.42
USP28-205ENST00000537706 PNRC1Q12796 327 aaPredicted RBP6.19□□□□□ -1.42
USP28-205ENST00000537706 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 TVP23CQ96ET8 276 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 LINC01587Q99440 93 aa6.19□□□□□ -1.42
USP28-205ENST00000537706 COLCA2A8K830 154 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 B4DEV8 164 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 CLN5O75503 358 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 AKR1C3P42330 323 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 RPL29P47914 159 aaKnown RBP6.18□□□□□ -1.42
USP28-205ENST00000537706 SUB1P53999 127 aaKnown RBP eCLIP6.18□□□□□ -1.42
USP28-205ENST00000537706 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
USP28-205ENST00000537706 SAMD13Q5VXD3 122 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 MIC13Q5XKP0 118 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 ZNF493Q6ZR52 646 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 TMEM256Q8N2U0 113 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 DOK5Q9P104 306 aa6.18□□□□□ -1.42
USP28-205ENST00000537706 A0A1W2PPV4 95 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 MT-ND4LP03901 98 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
USP28-205ENST00000537706 GCSAMLQ5JQS6 135 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 SCXQ7RTU7 201 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 TMEM144Q7Z5S9 345 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 LINC00467Q9BRT7 94 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 DNAJC4Q9NNZ3 241 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
USP28-205ENST00000537706 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 HMGB3O15347 200 aaKnown RBP6.17□□□□□ -1.42
USP28-205ENST00000537706 EIF3GO75821 320 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP28-205ENST00000537706 DUSP14O95147 198 aaKnown RBP6.17□□□□□ -1.42
USP28-205ENST00000537706 STAG3L2P0CL84 134 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 STAG3L3P0CL85 134 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 GPX4P36969 197 aaPredicted RBP6.17□□□□□ -1.42
USP28-205ENST00000537706 TAS2R60P59551 318 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 RHOBP62745 196 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 RNASEH2CQ8TDP1 164 aaKnown RBP6.17□□□□□ -1.42
USP28-205ENST00000537706 SLC35E1Q96K37 410 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 TMPRSS5Q9H3S3 457 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
USP28-205ENST00000537706 A0A096LPF7 62 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 A0A0J9YX75 114 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 CXorf1O96002 111 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 ARL14EPLP0DKL9 152 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 DEFB1P60022 68 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 IQCF2Q8IXL9 164 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 YPEL4Q96NS1 127 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 TXNDC17Q9BRA2 123 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 NAT8Q9UHE5 227 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 SLC45A2Q9UMX9 530 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 ICOSQ9Y6W8 199 aa6.16□□□□□ -1.42
USP28-205ENST00000537706 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
USP28-205ENST00000537706 PLAC8L1A1L4L8 177 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 ZNF98A6NK75 572 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms