RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 MEGF9Q9H1U4 602 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 SONP18583 2426 aaKnown RBP5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 hDV102S1A0JD36 115 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 CT83Q5H943 113 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 C8orf31Q8N9H6 132 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 CHAC1Q9BUX1 264 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 KLF12Q9Y4X4 402 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 CENPVL3A0A0U1RRI6 287 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 C3orf79P0CE67 100 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 PMVKQ15126 192 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 C10orf105Q8TEF2 133 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 TMEM141Q96I45 108 aa5.06□□□□□ -1.6
UBQLN1-206ENST00000533705 PTPN13Q12923 2485 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 IGKV2D-24A0A075B6R9 120 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 IGKV1OR2-108A0A075B7D4 117 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 ESDP10768 282 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 FOXI2Q6ZQN5 318 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 NOP10Q9NPE3 64 aaKnown RBP5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 UBE2CO00762 179 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 SLURP1P55000 103 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 OR11H6Q8NGC7 330 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 Q9HAA7 133 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 HIVEP2P31629 2446 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 NXPH4O95158 308 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 CLPSL2Q6UWE3 100 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 DNAJC30Q96LL9 226 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 RPL32P62910 135 aaKnown RBP5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 BLCAPP62952 87 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 FOXE3Q13461 319 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 POU2AF1Q16633 256 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 DKK4Q9UBT3 224 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 Q8N8P6 123 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 ZNF114Q8NC26 417 aa5.05□□□□□ -1.6
UBQLN1-206ENST00000533705 WDR81Q562E7 1941 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 HLA-DRB4P13762 266 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 NEGR1Q7Z3B1 354 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 HLA-DRB4X5D2U9 266 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 KLF5Q13887 457 aaPredicted RBP5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 DAZAP2Q15038 168 aaPredicted RBP5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 APRG1Q8IVJ8 170 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 ZNF491Q8N8L2 437 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 SNHG12Q9BXW3 62 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 F6UB75 175 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 RHOHQ15669 191 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 IGLV3-1P01715 115 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 C11orf53Q8IXP5 236 aa5.04□□□□□ -1.6
UBQLN1-206ENST00000533705 TRAV8-3A0A0A6YYJ7 113 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 SPRNQ5BIV9 151 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 MRPL53Q96EL3 112 aaKnown RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 SPAG8Q99932 426 aaPredicted RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 NAA38Q9BRA0 125 aaKnown RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 VOPP1Q96AW1 172 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 CYYR1Q96J86 154 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 RSPO3Q9BXY4 272 aaPredicted RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 TRAV26-2A0A0B4J265 109 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 HIST1H4AP62805 103 aaKnown RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 UBE2BP63146 152 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 CSPG4Q6UVK1 2322 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 A0A087X0K7 114 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 IGLC7A0M8Q6 106 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 SRSF2Q01130 221 aaKnown RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 PRSS57Q6UWY2 283 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 PYGO2Q9BRQ0 406 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 U3KQE9 123 aa5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 MRPL51Q4U2R6 128 aaKnown RBP5.03□□□□□ -1.6
UBQLN1-206ENST00000533705 PLXNA4Q9HCM2 1894 aa5.03□□□□□ -1.61
UBQLN1-206ENST00000533705 IGHV1-24A0A0C4DH33 117 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 CCL18P55774 89 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 HEATR5AQ86XA9 2040 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 TANC1Q9C0D5 1861 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 PTPRDP23468 1912 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 H3BMM0 161 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 Q6ZQT7 251 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 UBE2WQ96B02 151 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 FAM231DQ6ZW35 169 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 FXYD5Q96DB9 178 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 TECTAO75443 2155 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 A0A1W2PNU3 283 aaPredicted RBP5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 SPART-AS1P0CW21 52 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 STPG4Q8N801 248 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 NOTCH4Q99466 2003 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 IGHV7-81A0A0B4J1V7 117 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 ZC2HC1AQ96GY0 325 aa5.02□□□□□ -1.61
UBQLN1-206ENST00000533705 TEX48A0A1B0GUV7 120 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 ZFP36P26651 326 aaKnown RBP5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 HLA-DMBP28068 263 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 C18orf32Q8TCD1 76 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 AJUBAQ96IF1 538 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 A8MWP6 167 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 Q0VG73 95 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 MPV17L2Q567V2 206 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 Q8NFD4 153 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 SMIM2Q9BVW6 85 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 MED13Q9UHV7 2174 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 NPBQ8NG41 125 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 C1orf43Q9BWL3 253 aa5.01□□□□□ -1.61
UBQLN1-206ENST00000533705 AGPAT4-IT1Q9H0P7 198 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms