RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 INSL3P51460 131 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 SRSF1Q07955 248 aaKnown RBP eCLIP5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 ATXN8Q156A1 80 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 CCL19Q99731 98 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 ANKRD17O75179 2603 aaKnown RBP5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 ITPR1Q14643 2758 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 PMS2P5A8MQ11 134 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 H3BMM0 161 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 CCDC179H3BU77 68 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 MORN3Q6PF18 240 aaPredicted RBP5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 UBE2WQ96B02 151 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 TMEM78Q5T7P6 136 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 TMEM158Q8WZ71 300 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 IGKV3D-15A0A087WSY6 115 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 LINC00473A8K010 186 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 LTAP01374 205 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 FAM106CPP0CH98 169 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 TNFRSF1AP19438 455 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 PRDX2P32119 198 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 FAM106AQ4KMX7 169 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 LYZL1Q6UWQ5 148 aa5.44□□□□□ -1.54
TGFBR3-209ENST00000532540 TRAV3A0A0B4J244 114 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 PRR20EP86478 221 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 PRR20CP86479 221 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 PRR20DP86480 221 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 PRR20BP86481 221 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 PRR20AP86496 221 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 GDF5OSQ5U4N7 250 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 Q6ZR03 302 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 ZNRF1Q8ND25 227 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 OR13A1Q8NGR1 328 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 C1orf43Q9BWL3 253 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 TNFRSF18Q9Y5U5 241 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 ZNF785A8K8V0 405 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 SHISA9B4DS77 424 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 SMKR1H3BMG3 65 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 H7C1H1 209 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 FAM104BQ5XKR9 115 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 HCP5Q6MZN7 132 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 ANKRD29Q8N6D5 301 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 C8orf46Q8TAG6 207 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 SLC25A15Q9Y619 301 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 UTP20O75691 2785 aaKnown RBP5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 MAST4O15021 2626 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 LINC00205P59089 165 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 IGF2BP2-AS1Q96M15 143 aa5.43□□□□□ -1.54
TGFBR3-209ENST00000532540 A0A1W2PPI3 338 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 PRCDQ00LT1 54 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 ITLN2Q8WWU7 325 aaPredicted RBP5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 LEAP2Q969E1 77 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 TRACP01848 142 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 ADIPOQQ15848 244 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 RSPO1Q2MKA7 263 aaPredicted RBP5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 KIR2DL4Q99706 377 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 TM2D2Q9BX73 214 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 CALYQ9NYX4 217 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 FOXA2Q9Y261 457 aaPredicted RBP5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 ARHGAP32A7KAX9 2087 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 PTPRBP23467 1997 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 E7EQL1 145 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 MGPP08493 103 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 CRYBG3Q68DQ2 2970 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 DCTN5Q9BTE1 182 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 A0A1B0GXF2 115 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 RHODO00212 210 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 UPK2O00526 184 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 APELAP0DMC3 54 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 LAGE3Q14657 143 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 Q86TA4 180 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 DUX5Q96PT3 197 aa5.42□□□□□ -1.54
TGFBR3-209ENST00000532540 FAM216BQ8N7L0 139 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 SLC25A39Q9BZJ4 359 aaPredicted RBP5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 TMEM213A2RRL7 107 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 F5H697 171 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 NPFFO15130 113 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 RPL27AP46776 148 aaKnown RBP5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 FOXL2NBQ6ZUU3 175 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 PRO1854Q9UHT4 67 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 NDUFB3O43676 98 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 IGLV2-8P01709 118 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 HLA-DRB4P13762 266 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 MRPL51Q4U2R6 128 aaKnown RBP5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 Q6P435 159 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 HLA-DRB4X5D2U9 266 aa5.41□□□□□ -1.54
TGFBR3-209ENST00000532540 ATRQ13535 2644 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 FAM236AA0A1B0GUQ0 79 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 FAM236BA0A1B0GV22 79 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 SMIM9A6NGZ8 99 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 FGF6P10767 208 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 MLANAQ16655 118 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 ORMDL2Q53FV1 153 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 DNAJC30Q96LL9 226 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
TGFBR3-209ENST00000532540 VPREB3Q9UKI3 123 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms