RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
CTSB-223ENST00000532370 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
CTSB-223ENST00000532370 TMPRSS5Q9H3S3 457 aa12.3□□□□□ -0.44
CTSB-223ENST00000532370 GSN-AS1Q9NRJ2 163 aa12.3□□□□□ -0.44
CTSB-223ENST00000532370 TRBV7-9A0A0J9YWB2 115 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 CBY3A6NI87 242 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 GGTLC3B5MD39 225 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 FGF8P55075 233 aaPredicted RBP12.29□□□□□ -0.44
CTSB-223ENST00000532370 TMEM88Q6PEY1 159 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 STOML3Q8TAV4 291 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
CTSB-223ENST00000532370 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
CTSB-223ENST00000532370 PFDN1O60925 122 aa12.28□□□□□ -0.44
CTSB-223ENST00000532370 FHITP49789 147 aa12.28□□□□□ -0.44
CTSB-223ENST00000532370 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
CTSB-223ENST00000532370 EIF4E3Q8N5X7 224 aaKnown RBP12.28□□□□□ -0.44
CTSB-223ENST00000532370 C11orf72Q8NBR9 251 aa12.28□□□□□ -0.44
CTSB-223ENST00000532370 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 SNURFLB1AK76 121 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 F5H768 121 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 RGS13O14921 159 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 GAGE7O76087 117 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 EIF5AP63241 154 aaKnown RBP12.27□□□□□ -0.45
CTSB-223ENST00000532370 ANXA2RQ3ZCQ2 193 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 ARL6IP6Q8N6S5 226 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 LINC00612Q8N6U2 182 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 TMED6Q8WW62 240 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 ZNF471Q9BX82 626 aaPredicted RBP12.27□□□□□ -0.45
CTSB-223ENST00000532370 KLF12Q9Y4X4 402 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 FRAS1Q86XX4 4008 aa12.27□□□□□ -0.45
CTSB-223ENST00000532370 TCRAP04437 139 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 ATP5G1P05496 136 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 ATP5G3P48201 142 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 UBE2G2P60604 165 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
CTSB-223ENST00000532370 Q6ZTI0 123 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 C5orf17Q8NAS9 161 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 FAM210BQ96KR6 192 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 EPDR1Q9UM22 224 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 LENEPQ9Y5L5 61 aa12.26□□□□□ -0.45
CTSB-223ENST00000532370 F6UZH7 168 aa12.25□□□□□ -0.45
CTSB-223ENST00000532370 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
CTSB-223ENST00000532370 Q6AWC8 147 aa12.25□□□□□ -0.45
CTSB-223ENST00000532370 ZNF680Q8NEM1 530 aa12.25□□□□□ -0.45
CTSB-223ENST00000532370 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
CTSB-223ENST00000532370 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
CTSB-223ENST00000532370 TPT1P13693 172 aaKnown RBP12.24□□□□□ -0.45
CTSB-223ENST00000532370 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
CTSB-223ENST00000532370 TREM1Q9NP99 234 aa12.24□□□□□ -0.45
CTSB-223ENST00000532370 DNAH2Q9P225 4427 aa12.24□□□□□ -0.45
CTSB-223ENST00000532370 IGLV2-11P01706 119 aa12.23□□□□□ -0.45
CTSB-223ENST00000532370 SLC51BQ86UW2 128 aa12.23□□□□□ -0.45
CTSB-223ENST00000532370 LINC00479Q96M42 142 aa12.23□□□□□ -0.45
CTSB-223ENST00000532370 MDFICQ9P1T7 246 aa12.23□□□□□ -0.45
CTSB-223ENST00000532370 BIRC6Q9NR09 4857 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 FAM74A7A6NL05 159 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 P0DMU3 169 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 FAM231AP0DMU4 169 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 FAM231CP0DMU5 169 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 HOXA5P20719 270 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 NKX2-5P52952 324 aaPredicted RBP12.22□□□□□ -0.45
CTSB-223ENST00000532370 TCL1AP56279 114 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 C8orf49Q96NF6 230 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 PSG8Q9UQ74 426 aa12.22□□□□□ -0.45
CTSB-223ENST00000532370 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 UMAD1C9J7I0 102 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 SPINK4O60575 86 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 IFNA7P01567 189 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 OR5I1Q13606 314 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 TMEM183BQ1AE95 376 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.45
CTSB-223ENST00000532370 PRNTQ86SH4 94 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 POM121L12Q8N7R1 296 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 ATG101Q9BSB4 218 aa12.21□□□□□ -0.45
CTSB-223ENST00000532370 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
CTSB-223ENST00000532370 A0A1B0GV50 99 aa12.2□□□□□ -0.46
CTSB-223ENST00000532370 K7EQM0 130 aa12.2□□□□□ -0.46
CTSB-223ENST00000532370 GNRH2O43555 120 aa12.2□□□□□ -0.46
CTSB-223ENST00000532370 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
CTSB-223ENST00000532370 FLI1Q01543 452 aaPredicted RBP12.2□□□□□ -0.46
CTSB-223ENST00000532370 FAM159AQ6UWV7 190 aa12.2□□□□□ -0.46
CTSB-223ENST00000532370 SFT2D1Q8WV19 159 aa12.2□□□□□ -0.46
CTSB-223ENST00000532370 MRPL16Q9NX20 251 aaKnown RBP12.2□□□□□ -0.46
CTSB-223ENST00000532370 TRAV21A0A0B4J279 112 aa12.19□□□□□ -0.46
CTSB-223ENST00000532370 NUDT3O95989 172 aa12.19□□□□□ -0.46
CTSB-223ENST00000532370 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
CTSB-223ENST00000532370 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms