RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 IGLC1P0CG04 106 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 KRTAP27-1Q3LI81 207 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 LEPROTO15243 131 aa12.28□□□□□ -0.44
PCDHA4-203ENST00000530339 ASPHD1Q5U4P2 390 aa12.28□□□□□ -0.44
PCDHA4-203ENST00000530339 Q96MF0 132 aa12.28□□□□□ -0.44
PCDHA4-203ENST00000530339 OVOL3O00110 214 aa12.28□□□□□ -0.44
PCDHA4-203ENST00000530339 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
PCDHA4-203ENST00000530339 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
PCDHA4-203ENST00000530339 H3BMM0 161 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 CCL25O15444 150 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 NDUFS7O75251 213 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 Q6ZVH6 145 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 PRIMA1Q86XR5 153 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 UBE2WQ96B02 151 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 USF3Q68DE3 2245 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 C1orf159Q96HA4 380 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 TPSG1Q9NRR2 321 aa12.27□□□□□ -0.44
PCDHA4-203ENST00000530339 HIST1H4AP62805 103 aaKnown RBP12.27□□□□□ -0.45
PCDHA4-203ENST00000530339 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
PCDHA4-203ENST00000530339 MRPL53Q96EL3 112 aaKnown RBP12.27□□□□□ -0.45
PCDHA4-203ENST00000530339 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 H3BMG7 143 aa12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 K7EMI3 77 aa12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 TDRG1Q3Y452 100 aa12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 ABCA4P78363 2273 aa12.26□□□□□ -0.45
PCDHA4-203ENST00000530339 DKK2Q9UBU2 259 aa12.25□□□□□ -0.45
PCDHA4-203ENST00000530339 ATP6V0BQ99437 205 aa12.25□□□□□ -0.45
PCDHA4-203ENST00000530339 JPT2Q9H910 190 aa12.25□□□□□ -0.45
PCDHA4-203ENST00000530339 I3L3M4 83 aa12.25□□□□□ -0.45
PCDHA4-203ENST00000530339 IGF2-ASQ6U949 168 aa12.25□□□□□ -0.45
PCDHA4-203ENST00000530339 SS18Q15532 418 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 TRAV26-2A0A0B4J265 109 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 K7ERJ3 54 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 LY6HO94772 140 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 LENEPQ9Y5L5 61 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 DKK1O94907 266 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 C8orf86Q6ZUL3 223 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 SDHAF1A6NFY7 115 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 LINC01619G3V211 115 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 TCF15Q12870 199 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 C20orf78Q9BR46 151 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 EDA2RQ9HAV5 297 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 AZU1P20160 251 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 PIP4P1Q86T03 277 aa12.24□□□□□ -0.45
PCDHA4-203ENST00000530339 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 FAM120AOSQ5T036 256 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 C12orf74Q32Q52 190 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 FAM215AQ9Y5M1 114 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 FGF6P10767 208 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 PCNX1Q96RV3 2341 aa12.23□□□□□ -0.45
PCDHA4-203ENST00000530339 C6orf226Q5I0X4 101 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 AMTNQ6UX39 209 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 ZNF491Q8N8L2 437 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 KIAA1671Q9BY89 1806 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 CDK2AP2O75956 126 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 APOC4P55056 127 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 C11orf53Q8IXP5 236 aa12.22□□□□□ -0.45
PCDHA4-203ENST00000530339 DIAPH2-AS1Q14236 149 aa12.21□□□□□ -0.45
PCDHA4-203ENST00000530339 DEFB131AP59861 70 aa12.21□□□□□ -0.46
PCDHA4-203ENST00000530339 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 ANXA2RQ3ZCQ2 193 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 NOTCH4Q99466 2003 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 ELANEP08246 267 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 LAMTOR3Q9UHA4 124 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 LINC01545Q5VT33 79 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 ZMAT4Q9H898 229 aa12.2□□□□□ -0.46
PCDHA4-203ENST00000530339 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
PCDHA4-203ENST00000530339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHA4-203ENST00000530339 IGHV3-53P01767 116 aa12.19□□□□□ -0.46
PCDHA4-203ENST00000530339 G3V318 75 aa12.19□□□□□ -0.46
PCDHA4-203ENST00000530339 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
PCDHA4-203ENST00000530339 LHBP01229 141 aa12.19□□□□□ -0.46
PCDHA4-203ENST00000530339 RMI2Q96E14 147 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 F8WEM9 126 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 J3QQQ9 107 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 C17orf77Q96MU5 243 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 DENND4CQ5VZ89 1909 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 PRR30Q53SZ7 412 aaPredicted RBP12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 IGF2BP2-AS1Q96M15 143 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 IFITM1P13164 125 aa12.18□□□□□ -0.46
PCDHA4-203ENST00000530339 EGR2P11161 476 aaPredicted RBP12.17□□□□□ -0.46
PCDHA4-203ENST00000530339 PRSS33Q8NF86 280 aa12.17□□□□□ -0.46
PCDHA4-203ENST00000530339 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
PCDHA4-203ENST00000530339 ZNF48Q96MX3 618 aaPredicted RBP12.17□□□□□ -0.46
PCDHA4-203ENST00000530339 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms