RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
CPSF1-203ENST00000527916 CSN1S1P47710 185 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 ZNF138P52744 262 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 TAS2R45P59539 299 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 BTN1A1Q13410 526 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 OR5I1Q13606 314 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 FFAR4Q5NUL3 377 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 VGLL1Q99990 258 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 Q9H3A6 140 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 LENEPQ9Y5L5 61 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 TRAV26-1A0A087WT03 109 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 OR7C2O60412 319 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 SPINK4O60575 86 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 HOXA5P20719 270 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 XGP55808 180 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 TCL1AP56279 114 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
CPSF1-203ENST00000527916 KHDC3LQ587J8 217 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 CDPF1Q6NVV7 123 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 Q6ZTI0 123 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 TMED6Q8WW62 240 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 PHYHIPLQ96FC7 376 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 MBD2Q9UBB5 411 aa7.27□□□□□ -1.25
CPSF1-203ENST00000527916 IGHV1OR15-1A0A075B7D0 117 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 RGS13O14921 159 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 ZNF266Q14584 549 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 ACOT6Q3I5F7 207 aaPredicted RBP7.26□□□□□ -1.25
CPSF1-203ENST00000527916 PQLC2Q6ZP29 291 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 UPK3BQ9BT76 320 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 KRTAP1-5Q9BYS1 174 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
CPSF1-203ENST00000527916 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 PTTG1O95997 202 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
CPSF1-203ENST00000527916 FAM74A1Q5RGS3 127 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 PRR9Q5T870 116 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 SMIM3Q9BZL3 60 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 TMPRSS5Q9H3S3 457 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 WFDC1Q9HC57 220 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 TP53TG3Q9ULZ0 132 aa7.25□□□□□ -1.25
CPSF1-203ENST00000527916 TRGV1A0A0A0MS02 117 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 A0A0J9YY99 117 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 A0A1W2PPV4 95 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 PGPA6NDG6 321 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 SLAQ13239 276 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 ESRGQ1W209 222 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 Q6AWC8 147 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 VSIG2Q96IQ7 327 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 ARPC5LQ9BPX5 153 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 OTORQ9NRC9 128 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 ALG5Q9Y673 324 aa7.24□□□□□ -1.25
CPSF1-203ENST00000527916 A0A096LPF7 62 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 ERVFC1-1P60608 527 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 TDRG1Q3Y452 100 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 Q6ZQT7 251 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 Q6ZSN1 163 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 OR10G4Q8NGN3 311 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 OR10G9Q8NGN4 311 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 OR10G7Q8NGN6 311 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 OR2G3Q8NGZ4 309 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 Q8TAT8 98 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 CMTM2Q8TAZ6 248 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 ASB13Q8WXK3 278 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 AQP10Q96PS8 301 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 MDFICQ9P1T7 246 aa7.23□□□□□ -1.25
CPSF1-203ENST00000527916 MRPS16Q9Y3D3 137 aaKnown RBP7.23□□□□□ -1.25
CPSF1-203ENST00000527916 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
CPSF1-203ENST00000527916 SERF2P84101 59 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 IQCF2Q8IXL9 164 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 SUN5Q8TC36 379 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 RASL10AQ92737 203 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 SPXQ9BT56 116 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 PSMG3Q9BT73 122 aaPredicted RBP7.22□□□□□ -1.25
CPSF1-203ENST00000527916 MED28Q9H204 178 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 PRO0255Q9UI72 69 aa7.22□□□□□ -1.25
CPSF1-203ENST00000527916 SERTM2A0A1B0GWG4 89 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 PAX4O43316 350 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 MBP02144 154 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 STAG3L2P0CL84 134 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 STAG3L3P0CL85 134 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 LINC00315P59091 139 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 RAB2AP61019 212 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 FHL2Q14192 279 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 SERTAD4-AS1Q5TG53 156 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 SYT8Q8NBV8 401 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 HYLS1Q96M11 299 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 HHLA3Q9XRX5 114 aa7.21□□□□□ -1.26
CPSF1-203ENST00000527916 TRGV11A0A075B6L2 103 aa7.2□□□□□ -1.26
CPSF1-203ENST00000527916 TRAV21A0A0B4J279 112 aa7.2□□□□□ -1.26
CPSF1-203ENST00000527916 GIPP09681 153 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms