RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 URGCP-MRPS24S4R325 110 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 IGHV3-64A0A075B6Q5 118 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 H0Y9J4 135 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 J3QRE1 110 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 CORTO00230 105 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 GOSR2O14653 212 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 PPP1R2P9O14990 202 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 SNAPC5O75971 98 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 TSPAN13O95857 204 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 FAM107AO95990 144 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 IL4P05112 153 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 SEC11BP0C7V7 166 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 CTRLP40313 264 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 C11orf72Q8NBR9 251 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 OR1S2Q8NGQ3 325 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 PGLYRP3Q96LB9 341 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 MRPL36Q9P0J6 103 aaKnown RBP3.98□□□□□ -1.77
NEDD8-203ENST00000524927 PRNDQ9UKY0 176 aa3.98□□□□□ -1.77
NEDD8-203ENST00000524927 TRAV8-7A0A075B6U6 113 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 PFN1P07737 140 aaKnown RBP3.97□□□□□ -1.77
NEDD8-203ENST00000524927 IGLC1P0CG04 106 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 HSPA13P48723 471 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 SUPT4H1P63272 117 aaKnown RBP3.97□□□□□ -1.77
NEDD8-203ENST00000524927 KIAA0087Q14695 138 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 C2orf83Q53S99 150 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 SPINK9Q5DT21 86 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 SIKE1Q9BRV8 207 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 SAR1AQ9NR31 198 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 COMMD9Q9P000 198 aa3.97□□□□□ -1.77
NEDD8-203ENST00000524927 CSDC2Q9Y534 153 aaKnown RBP3.97□□□□□ -1.77
NEDD8-203ENST00000524927 A0A075B6Q4 140 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 ATG12O94817 140 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 ERHP84090 104 aaKnown RBP3.96□□□□□ -1.78
NEDD8-203ENST00000524927 HIST1H1AQ02539 215 aaPredicted RBP3.96□□□□□ -1.78
NEDD8-203ENST00000524927 C12orf73Q69YU5 71 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 ACBD7Q8N6N7 88 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 TMEM75Q8N9X5 138 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 FER1L6-AS1Q8NA97 138 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 OR8A1Q8NGG7 326 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 LYPD6BQ8NI32 183 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 DNAJC9Q8WXX5 260 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 EFCAB1Q9HAE3 211 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 CCL28Q9NRJ3 127 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 ARL2BPQ9Y2Y0 163 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 KMT2DO14686 5537 aa3.96□□□□□ -1.78
NEDD8-203ENST00000524927 IGKV1D-13A0A0B4J2D9 117 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 A0A0G2JND7 137 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 ZNF861PO60384 105 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 IGKV1-13P0DP09 117 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 PSMB9P28065 219 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 RPL5P46777 297 aaKnown RBP3.95□□□□□ -1.78
NEDD8-203ENST00000524927 UBE2D1P51668 147 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 SUB1P53999 127 aaKnown RBP eCLIP3.95□□□□□ -1.78
NEDD8-203ENST00000524927 TCL1AP56279 114 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 MSMO1Q15800 293 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 OR10G9Q8NGN4 311 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 DNAJC30Q96LL9 226 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 SH3BGRL3Q9H299 93 aa3.95□□□□□ -1.78
NEDD8-203ENST00000524927 SMCO3A2RU48 225 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 RD3LP0DJH9 198 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 SNCAP37840 140 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 OPRK1P41145 380 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 CATR1Q13166 79 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 RAB11BQ15907 218 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 Q6ZS49 121 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 LHFPL3Q86UP9 236 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 ARHGAP5-AS1Q96IT6 56 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 TSC22D3Q99576 134 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 PECRQ9BY49 303 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 LPAR5Q9H1C0 372 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 OR51M1Q9H341 326 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 FGF20Q9NP95 211 aaPredicted RBP3.94□□□□□ -1.78
NEDD8-203ENST00000524927 MRPL16Q9NX20 251 aaKnown RBP3.94□□□□□ -1.78
NEDD8-203ENST00000524927 KLF12Q9Y4X4 402 aa3.94□□□□□ -1.78
NEDD8-203ENST00000524927 MUC21A0A0G2JKD1 596 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 FABP12A6NFH5 140 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 SULT1C2O00338 296 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 IFNA7P01567 189 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 CTXN2P0C2S0 81 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 CRISP2P16562 243 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 NFYAP23511 347 aaPredicted RBP3.93□□□□□ -1.78
NEDD8-203ENST00000524927 OR10J1P30954 320 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 QRFPP83859 136 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 Q499Y3 187 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 CCDC58Q4VC31 144 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 RPL22L1Q6P5R6 122 aaKnown RBP3.93□□□□□ -1.78
NEDD8-203ENST00000524927 OR8I2Q8N0Y5 310 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 ZNF738Q8NE65 137 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 BPIFB6Q8NFQ5 453 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 OR51G1Q8NGK1 321 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 OR10G4Q8NGN3 311 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 OR2G3Q8NGZ4 309 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 GTSF1LQ9H1H1 148 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 ANAPC11Q9NYG5 84 aa3.93□□□□□ -1.78
NEDD8-203ENST00000524927 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms