RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PRH1P02810 166 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 MMP7P09237 267 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-223ENST00000523636 PRB4P10163 310 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-223ENST00000523636 PSG2P11465 335 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 AZU1P20160 251 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 CNTFRP26992 372 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 GNB2P62879 340 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 TNFAIP6P98066 277 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-223ENST00000523636 MEF2CQ06413 473 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF506Q5JVG8 444 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 LDLRAD2Q5SZI1 272 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF695Q8IW36 515 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 Q8N2B8 174 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 OR10AD1Q8NGE0 317 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 OR5A1Q8NGJ0 315 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 OR10D4PQ8NGN7 298 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 VN1R17PQ8TDU5 208 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 SECTM1Q8WVN6 248 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 CCL17Q92583 94 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 GNPNAT1Q96EK6 184 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-223ENST00000523636 MIEN1Q9BRT3 115 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 OR2J1Q9GZK6 312 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 WDR13Q9H1Z4 485 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 OR5AC2Q9NZP5 309 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 TRAPPC2LQ9UL33 140 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 LAMTOR2Q9Y2Q5 125 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 MPC1Q9Y5U8 109 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 A0A1B0GV50 99 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 A0A1B0GW64 132 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 IFITM10A6NMD0 228 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 E9PLD3 99 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 PPYP01298 95 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 LGALS1P09382 135 aaKnown RBP3.79□□□□□ -1.8
PABPC1-223ENST00000523636 VDAC1P21796 283 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 RBM11P57052 281 aaKnown RBP3.79□□□□□ -1.8
PABPC1-223ENST00000523636 FXYD4P59646 89 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 RPL7L1Q6DKI1 246 aaKnown RBP3.79□□□□□ -1.8
PABPC1-223ENST00000523636 C10orf99Q6UWK7 81 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 DPPA3Q6W0C5 159 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 SLC25A26Q70HW3 274 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 Q8IYB0 196 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 TCTEX1D1Q8N7M0 179 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 OR1L1Q8NH94 360 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 GPR146Q96CH1 333 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 PGLYRP4Q96LB8 373 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 METTL26Q96S19 204 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 SMIM3Q9BZL3 60 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 EIF5A2Q9GZV4 153 aaKnown RBP3.79□□□□□ -1.8
PABPC1-223ENST00000523636 PRO1933Q9H354 126 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 GNB4Q9HAV0 340 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 MRPL16Q9NX20 251 aaKnown RBP3.79□□□□□ -1.8
PABPC1-223ENST00000523636 TAAR3PQ9P1P4 343 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 NAT8BQ9UHF3 227 aa3.79□□□□□ -1.8
PABPC1-223ENST00000523636 IGLV3-9A0A075B6K5 115 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 IGKV1-27A0A075B6S5 117 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 TRBV6-6A0A0A6YYG2 114 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 TRAV26-2A0A0B4J265 109 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 C5orf49A4QMS7 147 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 C12orf77C9JDV5 145 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 NDUFC2O95298 119 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 SFTA3P0C7M3 94 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 GZMBP10144 247 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 SLC25A6P12236 298 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 SRIP30626 198 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 GABRA2P47869 451 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 PRR3P79522 188 aaKnown RBP3.78□□□□□ -1.8
PABPC1-223ENST00000523636 BATFQ16520 125 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 SP6Q3SY56 376 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 COA6Q5JTJ3 125 aaKnown RBP3.78□□□□□ -1.8
PABPC1-223ENST00000523636 LGALS9CQ6DKI2 356 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 C18orf65Q6ZTR6 163 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 MOB1BQ7L9L4 216 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 HIST3H2BBQ8N257 126 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 EXOC3-AS1Q8N2X6 119 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 DEFB125Q8N687 156 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 SCGB1C1Q8TD33 95 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 LRRC29Q8WV35 223 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 CHCHD10Q8WYQ3 142 aaPredicted RBP3.78□□□□□ -1.8
PABPC1-223ENST00000523636 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 CACFD1Q9UGQ2 172 aa3.78□□□□□ -1.8
PABPC1-223ENST00000523636 TRAV8-6A0A0B4J262 113 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 IGKV1-12A0A0C4DH73 117 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 A0A0G2JRQ6 117 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 PLAC8L1A1L4L8 177 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 MSGN1A6NI15 193 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 CD300LBA8K4G0 201 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 H3BP45 60 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 J3QR89 54 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 M0R2Z0 102 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 NAPSAO96009 420 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 IGKV1D-12P01611 117 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 IGHG2P01859 326 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 PATE4P0C8F1 98 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 EVI2AP22794 236 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 ATP6V0CP27449 155 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 G6PCP35575 357 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 SNCAP37840 140 aa3.77□□□□□ -1.81
PABPC1-223ENST00000523636 RPL29P47914 159 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms