RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PRDX1Q06830 199 aaKnown RBP2.38□□□□□ -2.03
SKP1-208ENST00000521216 EIF3IQ13347 325 aaKnown RBP2.38□□□□□ -2.03
SKP1-208ENST00000521216 ZNF141Q15928 474 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 SPRNQ5BIV9 151 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 C9orf153Q5TBE3 101 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 HRCT1Q6UXD1 115 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 CYP2G1PQ6ZSU1 146 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 TCF23Q7RTU1 214 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 C10orf126Q8N4M7 172 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 LINC00471Q8N535 108 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 OR10AC1Q8NH08 325 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 SGMS2Q8NHU3 365 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 MYOZ3Q8TDC0 251 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 DPH3Q96FX2 82 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 PLA2G12AQ9BZM1 189 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 TAAR3PQ9P1P4 343 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 PKIGQ9Y2B9 76 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 TRAPPC1Q9Y5R8 145 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 DENND4CQ5VZ89 1909 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 STRCP1A6NGW2 1772 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 KCPQ6ZWJ8 1503 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 LY75O60449 1722 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 TIAM2Q8IVF5 1701 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 MYLKQ15746 1914 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 DLG5Q8TDM6 1919 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 ALPK3Q96L96 1907 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 TECPR2O15040 1411 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 RGPD3A6NKT7 1758 aaPredicted RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 hCG_1818297A0A087WSY0 165 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 MYBPHLA2RUH7 354 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 IZUMO1RA6ND01 250 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 ZNF736B4DX44 427 aaPredicted RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 LY6LH3BQJ8 138 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 NDUFS5O43920 106 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 DEDDO75618 318 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 APOC2P02655 101 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 C3orf79P0CE67 100 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 SMIM13P0DJ93 91 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 CPMP14384 443 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 ZNF708P17019 499 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 TAS2R45P59539 299 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 Q56UQ5 140 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 MRPL2Q5T653 305 aaKnown RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 HES3Q5TGS1 186 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 LYRM7Q5U5X0 104 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 Q6ZRU5 148 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 ZNF550Q7Z398 422 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 RPS19BP1Q86WX3 136 aaKnown RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 BPIFA4PQ86YQ2 179 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 ANKRD29Q8N6D5 301 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 C15orf53Q8NAA6 179 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 LSM10Q969L4 123 aaKnown RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 SLC25A44Q96H78 314 aaPredicted RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 NAA38Q9BRA0 125 aaKnown RBP2.37□□□□□ -2.03
SKP1-208ENST00000521216 RTL8AQ9BWD3 113 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 CMC2Q9NRP2 79 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 TVP23BQ9NYZ1 205 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 DNAJC15Q9Y5T4 150 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 NRXN3Q9Y4C0 1643 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 DSPPQ9NZW4 1301 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 NRAPQ86VF7 1730 aa2.37□□□□□ -2.03
SKP1-208ENST00000521216 DUOX1Q9NRD9 1551 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 ADAMTSL1Q8N6G6 1762 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 TRAV26-2A0A0B4J265 109 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 TRBV7-7A0A0K0K1E9 115 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 LOC107986453A0A1B0GWG9 222 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 SSSCA1O60232 199 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 FSTL3O95633 263 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 TRACP01848 142 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 COX8AP10176 69 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 HLA-DMBP28068 263 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 FOXA3P55318 350 aaPredicted RBP2.36□□□□□ -2.03
SKP1-208ENST00000521216 VMA21Q3ZAQ7 101 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 ETDBQ3ZM63 59 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 NMSQ5H8A3 153 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 FAM201AQ5SY85 155 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 FAM104BQ5XKR9 115 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 SPATA12Q7Z6I5 190 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 LHFPL1Q86WI0 220 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 BAGE3Q86Y29 109 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 BAGE2Q86Y30 109 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 EXOC3-AS1Q8N2X6 119 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 OR8B3Q8NGG8 313 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 STAG3L4Q8TBR4 150 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 FAM57AQ8TBR7 257 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 ITLN2Q8WWU7 325 aaPredicted RBP2.36□□□□□ -2.03
SKP1-208ENST00000521216 PGLYRP3Q96LB9 341 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 LINC01600Q96MT4 127 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 PRELID3AQ96N28 172 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 AMELYQ99218 206 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 C20orf78Q9BR46 151 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 KCNIP2Q9NS61 270 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 R4GN34 69 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 ROBO1Q9Y6N7 1651 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 PLXNA4Q9HCM2 1894 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 KIDINS220Q9ULH0 1771 aa2.36□□□□□ -2.03
SKP1-208ENST00000521216 MYO18AQ92614 2054 aaKnown RBP2.35□□□□□ -2.03
SKP1-208ENST00000521216 NYNRINQ9P2P1 1898 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms