RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SAV1Q9H4B6 383 aaPredicted RBP6.39□□□□□ -1.39
VAPB-206ENST00000520497 SRD5A3Q9H8P0 318 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 IGKV3-7A0A075B6H7 116 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 FAM231BA6NCW3 169 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 ZNF705FA8MVS1 300 aaPredicted RBP6.38□□□□□ -1.39
VAPB-206ENST00000520497 IGLV1-51P01701 117 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 IGLV2-11P01706 119 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 MT-ND6P03923 174 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 S100A8P05109 93 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 CXCL1P09341 107 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 C9orf47Q6ZRZ4 202 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 OR2K2Q8NGT1 345 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 TSKUQ8WUA8 353 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 PRR25Q96S07 402 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 ASCL2Q99929 193 aa6.38□□□□□ -1.39
VAPB-206ENST00000520497 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 TRBV7-9A0A0J9YWB2 115 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 SMIM27A0A1W2PRY6 76 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 TMEM189A5PLL7 270 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 C19orf71A6NCJ1 209 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 IZUMO1RA6ND01 250 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 PRAC2D3DTV9 90 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 SAP30O75446 220 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 DUSP14O95147 198 aaKnown RBP6.37□□□□□ -1.39
VAPB-206ENST00000520497 HIST1H1AQ02539 215 aaPredicted RBP6.37□□□□□ -1.39
VAPB-206ENST00000520497 EBLN2Q6P2I7 272 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 C3orf56Q8N813 242 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 WFDC9Q8NEX5 89 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 OR2D3Q8NGH3 330 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 ZC2HC1AQ96GY0 325 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
VAPB-206ENST00000520497 PPP1R14DQ9NXH3 145 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 ZNF256Q9Y2P7 627 aaPredicted RBP6.37□□□□□ -1.39
VAPB-206ENST00000520497 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
VAPB-206ENST00000520497 OR4C46A6NHA9 309 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 FABP5P3A8MUU1 101 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 HLA-DQA1P01909 254 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 PRB4P10163 310 aaPredicted RBP6.36□□□□□ -1.39
VAPB-206ENST00000520497 TFPI2P48307 235 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 INSL3P51460 131 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 CMC4P56277 68 aaPredicted RBP6.36□□□□□ -1.39
VAPB-206ENST00000520497 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 OR8A1Q8NGG7 326 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 Q8TAT8 98 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 VGLL1Q99990 258 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
VAPB-206ENST00000520497 MEGF8Q7Z7M0 2845 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 A0A1B0GW15 77 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 SH2D1AO60880 128 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 ZNF688P0C7X2 276 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 TSPOP30536 169 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 LEPP41159 167 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 TCL1AP56279 114 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 ERCC8Q13216 396 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 C9orf66Q5T8R8 295 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 FRZBQ92765 325 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 C8orf49Q96NF6 230 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 ODF3Q96PU9 254 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 GNB1LQ9BYB4 327 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 AGPAT4-IT1Q9H0P7 198 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
VAPB-206ENST00000520497 HIGD1CA8MV81 97 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 ORM1P02763 201 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 DEFB1P60022 68 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 RAB4BP61018 213 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 RIGQ13278 110 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 ODF3L2Q3SX64 289 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 ACTL10Q5JWF8 245 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 NEU1Q99519 415 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 MCRIP2Q9BUT9 160 aaKnown RBP6.34□□□□□ -1.39
VAPB-206ENST00000520497 MAP6D1Q9H9H5 199 aa6.34□□□□□ -1.39
VAPB-206ENST00000520497 TRAV21A0A0B4J279 112 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 A0A0J9YX75 114 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 A8MTW9 85 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 SNURFLB1AK76 121 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 F6UB75 175 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 TRGC2P03986 189 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 GPX1P07203 203 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 ZNF705DP0CH99 300 aaPredicted RBP6.33□□□□□ -1.4
VAPB-206ENST00000520497 ZNF705BP0CI00 300 aaPredicted RBP6.33□□□□□ -1.4
VAPB-206ENST00000520497 CD33P20138 364 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 HBBP68871 147 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
VAPB-206ENST00000520497 ZFP82Q8N141 532 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 FAM110AQ9BQ89 295 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 GPR61Q9BZJ8 451 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 NOTCH1P46531 2555 aa6.33□□□□□ -1.4
VAPB-206ENST00000520497 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms