RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KLF13Q9Y2Y9 288 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 SPCS1Q9Y6A9 102 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 ASXL3Q9C0F0 2248 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 CENPVL3A0A0U1RRI6 287 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 UBE2L5PA0A1B0GUS4 154 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A1W2PRE2 83 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 LINC01546A6NGU7 62 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 IQCF6A8MYZ5 107 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 LINC01619G3V211 115 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 M0R2Z0 102 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF207O43670 478 aaKnown RBP2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR2H2O95918 312 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 ARL14EPLP0DKL9 152 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 CGB3P0DN86 165 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 CGB7P0DN87 165 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 HIST1H1EP10412 219 aaKnown RBP2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 HLA-DRB4P13762 266 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 HTR1DP28221 377 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 GCHFRP30047 84 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 TIMM23BQ5SRD1 257 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q6AWC8 147 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 ATP5L2Q7Z4Y8 100 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 BPIFA4PQ86YQ2 179 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 DRAM1Q8N682 238 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM251Q8N6I4 163 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 NUP35Q8NFH5 326 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR4X2Q8NGF9 303 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 BORCS7Q96B45 105 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 CARD19Q96LW7 228 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 MGST2Q99735 147 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 C20orf78Q9BR46 151 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 RTL8AQ9BWD3 113 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 TTTY12Q9BZ98 90 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 RAB1BQ9H0U4 201 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 LINC00574Q9H8X3 128 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 SS18L2Q9UHA2 77 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 KLF12Q9Y4X4 402 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 HLA-DRB4X5D2U9 266 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 INTS1Q8N201 2190 aaKnown RBP2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 NAV3Q8IVL0 2385 aa2.12□□□□□ -2.07
HMGB1P41-201ENST00000520234 CACNA1EQ15878 2313 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 TRGV5A0A0B4J1U4 118 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 KBTBD11-OT1A0A1B0GTJ5 212 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 TCRBV4S1A1TA0A5B7 111 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM30CPA0ZSE6 113 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 GGTLC3B5MD39 225 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 IGLL5B9A064 214 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 KRTAP4-16G5E9R7 235 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 H3BMG7 143 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 M0QXV9 152 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 MPDU1O75352 247 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 HSBP1O75506 76 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 FSTL3O95633 263 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 NCR2O95944 276 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CXorf1O96002 111 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 LHBP01229 141 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 SPINK8P0C7L1 97 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 RBMY1CP0DJD4 496 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CT45A6P0DMU7 189 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CT45A5P0DMU8 189 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CT45A7P0DMV0 189 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 IAPPP10997 89 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 FABP2P12104 132 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 NTF3P20783 257 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 MYCNOSP40205 109 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 VDAC2P45880 294 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 UQCRFS1P47985 274 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 FXYD2P54710 66 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 FOXA3P55318 350 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 DLX1P56177 255 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 DIAPH2-AS1Q14236 149 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 TBC1D28Q2M2D7 210 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 LGALS9BQ3B8N2 356 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 ETDBQ3ZM63 59 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 SPRNQ5BIV9 151 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CENPWQ5EE01 88 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CT45A1Q5HYN5 189 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 FAM162BQ5T6X4 162 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 LGALS9CQ6DKI2 356 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q6Q795 121 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q6ZT83 130 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 WDR86Q86TI4 376 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 MDP1Q86V88 176 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZADH2Q8N4Q0 377 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR51H1Q8NH63 302 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR9G1Q8NH87 305 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CT45A3Q8NHU0 189 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 SRSF12Q8WXF0 261 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 NRGNQ92686 78 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 RPEQ96AT9 228 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 FAM167A-AS1Q96KT0 104 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CDX2Q99626 313 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 HSD17B10Q99714 261 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 RASL11BQ9BPW5 248 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 NAA38Q9BRA0 125 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 MRPL32Q9BYC8 188 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM191AQ9H0A3 160 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 RNASE7Q9H1E1 156 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF331Q9NQX6 463 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms