RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 UBE2V1Q13404 147 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SPINK13Q1W4C9 94 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF674Q2M3X9 581 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 DPPA3Q6W0C5 159 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 OR11H2Q8NH07 326 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PRSS3P2Q8NHM4 247 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 MBD3L1Q8WWY6 194 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 MRPL53Q96EL3 112 aaKnown RBP4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 LINC00477Q96M19 166 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RARRES2Q99969 163 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 VGLL1Q99990 258 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TMEM208Q9BTX3 173 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 AGPAT4-IT1Q9H0P7 198 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 DNAH3Q8TD57 4116 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 MEGF8Q7Z7M0 2845 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 IGKV2-40A0A087WW87 121 aaPredicted RBP4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 A0A1W2PRE2 83 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ZNF705EA8MWA4 302 aaPredicted RBP4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TEX46H3BTG2 121 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 BOLA2-SMG1P6H3BVE0 249 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 M0R2Z0 102 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 IFNA7P01567 189 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 IGKV2D-40P01614 121 aaPredicted RBP4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 CT45A10P0DMU9 189 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TSPOP30536 169 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 CDKN1BP46527 198 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 SULT1A2P50226 295 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GNG5P63218 68 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 C10orf25Q5T742 122 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TMEM78Q5T7P6 136 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 AMTNQ6UX39 209 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ALKAL2Q6UX46 152 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GOLT1AQ6ZVE7 132 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 SUN5Q8TC36 379 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 SGK494Q96LW2 274 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 LINC01587Q99440 93 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TP53TG1Q9Y2A0 90 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GOLT1BQ9Y3E0 138 aa4.21□□□□□ -1.74
SCARNA6.1-201ENST00000516989 FAM74A7A6NL05 159 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 K7EQM0 130 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 DEFB4AO15263 64 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 NUDT3O95989 172 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 INSP01308 110 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 HBE1P02100 147 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 AMBPP02760 352 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GPX1P07203 203 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 HTN1P15515 57 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 RNASE4P34096 147 aaKnown RBP4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 LEPP41159 167 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ZNF138P52744 262 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 KRTAP10-2P60368 255 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 CCL20P78556 96 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 C9orf47Q6ZRZ4 202 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 C5orf17Q8NAS9 161 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 CSNK1G2-AS1Q8NCQ2 148 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 IGF2BP2-AS1Q96M15 143 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 NKX6-2Q9C056 277 aaPredicted RBP4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ZNF492Q9P255 531 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 EPDR1Q9UM22 224 aa4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 YTHDF2Q9Y5A9 579 aaKnown RBP4.2□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TRAV8-1A0A0A6YYK1 113 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TRAV12-3A0A0B4J271 114 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 A0A0J9YWU9 116 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 RBAKDNA6NC62 111 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 A8MTW9 85 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ZNF705GA8MUZ8 300 aaPredicted RBP4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GGTLC3B5MD39 225 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 F6UZH7 168 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 CRXO43186 299 aaPredicted RBP4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TCRAP04437 139 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 PRM2P04554 102 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 PPT1P50897 306 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 EMP1P54849 157 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 RRN3P1Q2M238 152 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 C1orf158Q8N1D5 194 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ARL6IP6Q8N6S5 226 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 MPLKIPQ8TAP9 179 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 Q8TAT8 98 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 URB1-AS1Q96HZ7 61 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GNG13Q9P2W3 67 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 PSG8Q9UQ74 426 aa4.19□□□□□ -1.74
SCARNA6.1-201ENST00000516989 TRAV1-1A0A0B4J248 108 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 IGHV4-28A0A0C4DH34 117 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 SMIM9A6NGZ8 99 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 C11orf94C9JXX5 98 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 H7BYZ3 331 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 IFNA1P01562 189 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 MIFP14174 115 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ATP5G3P48201 142 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 BTN1A1Q13410 526 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 PAPPA-AS1Q5QFB9 102 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 GFI1BQ5VTD9 330 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 WDR73Q6P4I2 378 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 ZNF705AQ6ZN79 300 aaPredicted RBP4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 PRNTQ86SH4 94 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 KRTAP19-1Q8IUB9 90 aa4.18□□□□□ -1.74
SCARNA6.1-201ENST00000516989 CYB561D1Q8N8Q1 229 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms