RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 RASL10AQ92737 203 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 PFDN5Q99471 154 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.45□□□□□ -0.26
SQSTM1-215ENST00000514093 UBE2MP61081 183 aaKnown RBP13.45□□□□□ -0.26
SQSTM1-215ENST00000514093 SLIRPQ9GZT3 109 aaKnown RBP13.45□□□□□ -0.26
SQSTM1-215ENST00000514093 TMEM14CQ9P0S9 112 aa13.45□□□□□ -0.26
SQSTM1-215ENST00000514093 FLVCR2Q9UPI3 526 aa13.45□□□□□ -0.26
SQSTM1-215ENST00000514093 IGHV3-16A0A0C4DH30 117 aa13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 TMEM183BQ1AE95 376 aa13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 OR10J3Q5JRS4 329 aa13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 TMEM183AQ8IXX5 376 aa13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 C12orf45Q8N5I9 185 aaPredicted RBP13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 OR4C5Q8NGB2 326 aa13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 AAMDCQ9H7C9 122 aa13.44□□□□□ -0.26
SQSTM1-215ENST00000514093 MBPP02686 304 aaPredicted RBP13.43□□□□□ -0.26
SQSTM1-215ENST00000514093 SLC39A9Q9NUM3 307 aa13.43□□□□□ -0.26
SQSTM1-215ENST00000514093 TRAV8-6A0A0B4J262 113 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 TRAV4A0A0B4J268 109 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 CST7O76096 145 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 ZNF138P52744 262 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 TIRAPP58753 221 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 PDE6HQ13956 83 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 SPXQ9BT56 116 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 WDR83OSQ9Y284 106 aa13.42□□□□□ -0.26
SQSTM1-215ENST00000514093 L7N2F9 121 aa13.41□□□□□ -0.26
SQSTM1-215ENST00000514093 BCAP31P51572 246 aa13.41□□□□□ -0.26
SQSTM1-215ENST00000514093 VAMP2P63027 116 aa13.41□□□□□ -0.26
SQSTM1-215ENST00000514093 SH2D6Q7Z4S9 175 aa13.41□□□□□ -0.26
SQSTM1-215ENST00000514093 RPL29P47914 159 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 ZNF846Q147U1 533 aa13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 TM2D2Q9BX73 214 aa13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 UQCC1Q9NVA1 299 aa13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 V9GYH0 126 aa13.4□□□□□ -0.26
SQSTM1-215ENST00000514093 UBE2L5PA0A1B0GUS4 154 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 FAM24AA6NFZ4 105 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 BAXQ07812 192 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 FAM159AQ6UWV7 190 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 Q8N3U1 123 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 SLC25A2Q9BXI2 301 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 C20orf85Q9H1P6 137 aa13.39□□□□□ -0.27
SQSTM1-215ENST00000514093 GATA1P15976 413 aaPredicted RBP13.38□□□□□ -0.27
SQSTM1-215ENST00000514093 CAV2P51636 162 aa13.38□□□□□ -0.27
SQSTM1-215ENST00000514093 ZNF266Q14584 549 aa13.38□□□□□ -0.27
SQSTM1-215ENST00000514093 MRPS26Q9BYN8 205 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-215ENST00000514093 NAGKQ9UJ70 344 aa13.38□□□□□ -0.27
SQSTM1-215ENST00000514093 LSM5Q9Y4Y9 91 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-215ENST00000514093 TRGV11A0A075B6L2 103 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 GNRH2O43555 120 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 NDUFB6O95139 128 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 DEDD2Q8WXF8 326 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 BAALCQ8WXS3 180 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 PKHD1L1Q86WI1 4243 aa13.37□□□□□ -0.27
SQSTM1-215ENST00000514093 CCSO14618 274 aa13.36□□□□□ -0.27
SQSTM1-215ENST00000514093 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-215ENST00000514093 NBEAP1P0C6P0 100 aa13.36□□□□□ -0.27
SQSTM1-215ENST00000514093 TMBIM6P55061 237 aa13.36□□□□□ -0.27
SQSTM1-215ENST00000514093 CIRBP-AS1Q8TBR5 109 aa13.36□□□□□ -0.27
SQSTM1-215ENST00000514093 TRBV7-9A0A0J9YWB2 115 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 M0R2P5 195 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 BAK1Q16611 211 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 Q6AWC8 147 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 FAM167A-AS1Q96KT0 104 aa13.35□□□□□ -0.27
SQSTM1-215ENST00000514093 RNF213Q63HN8 5207 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 RBFOX3A6NFN3 312 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 OR10J4P0C629 311 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 FGF7P21781 194 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 LAGE3Q14657 143 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 LELP1Q5T871 98 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 PHYHIPLQ96FC7 376 aa13.34□□□□□ -0.27
SQSTM1-215ENST00000514093 OR51M1Q9H341 326 aa13.33□□□□□ -0.28
SQSTM1-215ENST00000514093 IGHV3-73A0A0B4J1V6 119 aa13.32□□□□□ -0.28
SQSTM1-215ENST00000514093 FAM25EA8MYX2 175 aa13.32□□□□□ -0.28
SQSTM1-215ENST00000514093 H3BMQ9 156 aa13.32□□□□□ -0.28
SQSTM1-215ENST00000514093 MITD1Q8WV92 249 aa13.32□□□□□ -0.28
SQSTM1-215ENST00000514093 C11orf1Q9H5F2 150 aa13.32□□□□□ -0.28
SQSTM1-215ENST00000514093 BOLA1Q9Y3E2 137 aa13.32□□□□□ -0.28
SQSTM1-215ENST00000514093 FBLL1A6NHQ2 334 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 IGLV2-8P01709 118 aa13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 TDRG1Q3Y452 100 aa13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 DAZ4Q86SG3 579 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 CHAC2Q8WUX2 184 aa13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 FXYD5Q96DB9 178 aa13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 BCL7BQ9BQE9 202 aa13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 PRADC1Q9BSG0 188 aa13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 DAZ3Q9NR90 486 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-215ENST00000514093 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 S100A11P31949 105 aa13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 CSN1S1P47710 185 aa13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 SULT1A1P50225 295 aa13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 HNRNPA3P51991 378 aaKnown RBP13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 RANP62826 216 aaKnown RBP13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 PAXXQ9BUH6 204 aa13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 GTSF1LQ9H1H1 148 aa13.3□□□□□ -0.28
SQSTM1-215ENST00000514093 TRAV8-3A0A0A6YYJ7 113 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms