RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 ETDBQ3ZM63 59 aa13.74□□□□□ -0.21
ARHGEF28-212ENST00000513042 U3KQA8 63 aa13.74□□□□□ -0.21
ARHGEF28-212ENST00000513042 CRYGCP07315 174 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 LGALS9BQ3B8N2 356 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 LGALS9CQ6DKI2 356 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 HOXB4P17483 251 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 IGKV1OR2-108A0A075B7D4 117 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 LHBP01229 141 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 H3BMG7 143 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 FOXE3Q13461 319 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 C1orf147Q96MC9 270 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 SMIM2Q9BVW6 85 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 PRO1854Q9UHT4 67 aa13.73□□□□□ -0.21
ARHGEF28-212ENST00000513042 PHF3Q92576 2039 aaKnown RBP13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 A0A1W2PPM0 123 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 NDUFS7O75251 213 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 SDK2Q58EX2 2172 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 VWA8A3KMH1 1905 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 IFITM1P13164 125 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 DYNAPQ8N1N2 210 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 F8W1H4 67 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 CFPP27918 469 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 DEFB136Q30KP8 78 aa13.72□□□□□ -0.21
ARHGEF28-212ENST00000513042 J3QQQ9 107 aa13.71□□□□□ -0.21
ARHGEF28-212ENST00000513042 IGKV2D-24A0A075B6R9 120 aa13.71□□□□□ -0.21
ARHGEF28-212ENST00000513042 HERVK_113P63121 156 aa13.71□□□□□ -0.21
ARHGEF28-212ENST00000513042 K7EP13 123 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 FAM231DQ6ZW35 169 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 UTF1Q5T230 341 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 AMTNQ6UX39 209 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 TRAV13-2A0A0B4J235 113 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 E9PQ18 207 aa13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 KLF2Q9Y5W3 355 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF28-212ENST00000513042 LTAP01374 205 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 TRACP01848 142 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 MRPL53Q96EL3 112 aaKnown RBP13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 C22orf46C9J442 243 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 U3KQE9 123 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 THSD7BQ9C0I4 1608 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 MYLKQ15746 1914 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 APRG1Q8IVJ8 170 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 Q9HAA7 133 aa13.69□□□□□ -0.22
ARHGEF28-212ENST00000513042 SPRNQ5BIV9 151 aa13.68□□□□□ -0.22
ARHGEF28-212ENST00000513042 LINC00311Q8N616 119 aa13.68□□□□□ -0.22
ARHGEF28-212ENST00000513042 F8VRH5 84 aa13.68□□□□□ -0.22
ARHGEF28-212ENST00000513042 TCF20Q9UGU0 1960 aaKnown RBP13.68□□□□□ -0.22
ARHGEF28-212ENST00000513042 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF28-212ENST00000513042 EGR2P11161 476 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-212ENST00000513042 GATA1P15976 413 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-212ENST00000513042 UBE2BP63146 152 aa13.67□□□□□ -0.22
ARHGEF28-212ENST00000513042 IGHV4-59P01825 116 aa13.67□□□□□ -0.22
ARHGEF28-212ENST00000513042 RPL18AQ02543 176 aaKnown RBP13.67□□□□□ -0.22
ARHGEF28-212ENST00000513042 DEFB112Q30KQ8 113 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 SHISA9B4DS77 424 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 RMI2Q96E14 147 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 K7EM74 188 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 FAM215AQ9Y5M1 114 aa13.66□□□□□ -0.22
ARHGEF28-212ENST00000513042 IGLV1-44P01699 117 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 GRNP28799 593 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 MED12Q93074 2177 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 PYGO2Q9BRQ0 406 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 J3QLI3 93 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 Q6ZVH6 145 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 CITED1Q99966 193 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 CRYBA4P53673 196 aa13.65□□□□□ -0.22
ARHGEF28-212ENST00000513042 KIAA2026Q5HYC2 2103 aa13.65□□□□□ -0.23
ARHGEF28-212ENST00000513042 Q9H8V8 135 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 APC2O95996 2303 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 PRB2P02812 416 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 C10orf91Q5T1B1 145 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 IGFL3Q6UXB1 125 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 SLURP1P55000 103 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 C20orf78Q9BR46 151 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 NCOR1P1Q9H4R4 102 aa13.64□□□□□ -0.23
ARHGEF28-212ENST00000513042 GAGE12HA6NDE8 117 aa13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 NTN5Q8WTR8 489 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 RPL39LQ96EH5 51 aaKnown RBP13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 ANKRD29Q8N6D5 301 aa13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 RITA1Q96K30 269 aa13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 MYO7BQ6PIF6 2116 aa13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 ETV2O00321 342 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 IGHV4-28A0A0C4DH34 117 aa13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 BOD1L2Q8IYS8 172 aa13.63□□□□□ -0.23
ARHGEF28-212ENST00000513042 RHOHQ15669 191 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 K7EMI3 77 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 PCP2Q8IVA1 136 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 KMT2EQ8IZD2 1858 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 C5orf38Q86SI9 138 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 AGPAT4-IT1Q9H0P7 198 aa13.62□□□□□ -0.23
ARHGEF28-212ENST00000513042 CDPF1Q6NVV7 123 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms