RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 J3KRW8 73 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 PEX7O00628 323 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 RGS13O14921 159 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 S100A9P06702 114 aaKnown RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 RBMY1A1P0DJD3 496 aaKnown RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 RBMY1CP0DJD4 496 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 PRB4P10163 310 aaPredicted RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 HTN1P15515 57 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 UBE2G1P62253 170 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 GNG5P63218 68 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 BLOC1S1P78537 153 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 FLI1Q01543 452 aaPredicted RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 RBMY1FQ15415 496 aaKnown RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 Q8TAT8 98 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 LINC00467Q9BRT7 94 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 TREM1Q9NP99 234 aa6.59□□□□□ -1.35
NUP54-207ENST00000508583 KLK5Q9Y337 293 aaPredicted RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 YTHDF2Q9Y5A9 579 aaKnown RBP6.59□□□□□ -1.35
NUP54-207ENST00000508583 TRAV21A0A0B4J279 112 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 ZNF705GA8MUZ8 300 aaPredicted RBP6.58□□□□□ -1.36
NUP54-207ENST00000508583 SNURFLB1AK76 121 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 DEFB4AO15263 64 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 PAGE4O60829 102 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 NKX2-5P52952 324 aaPredicted RBP6.58□□□□□ -1.36
NUP54-207ENST00000508583 EMP1P54849 157 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 Q6AWC8 147 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 FAM159AQ6UWV7 190 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 EIF4E3Q8N5X7 224 aaKnown RBP6.58□□□□□ -1.36
NUP54-207ENST00000508583 PSG8Q9UQ74 426 aa6.58□□□□□ -1.36
NUP54-207ENST00000508583 TIMM8BQ9Y5J9 83 aaPredicted RBP6.58□□□□□ -1.36
NUP54-207ENST00000508583 TRAV8-1A0A0A6YYK1 113 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 A0A1B0GV50 99 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 CBY3A6NI87 242 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 ZNF324O75467 553 aaPredicted RBP6.57□□□□□ -1.36
NUP54-207ENST00000508583 AKR1C3P42330 323 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 BTN1A1Q13410 526 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 PMS2P11Q13670 270 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 ANXA2RQ3ZCQ2 193 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 CASC10Q5T4H9 136 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 ALKAL2Q6UX46 152 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 PRNTQ86SH4 94 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 RNASE8Q8TDE3 154 aaKnown RBP6.57□□□□□ -1.36
NUP54-207ENST00000508583 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 DKK2Q9UBU2 259 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 ZFP30Q9Y2G7 519 aa6.57□□□□□ -1.36
NUP54-207ENST00000508583 TRGV11A0A075B6L2 103 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 TRAV10A0A0B4J240 114 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 PDE6DO43924 150 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 NANOS2P60321 138 aaKnown RBP6.56□□□□□ -1.36
NUP54-207ENST00000508583 DAD1P61803 113 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 KIR3DS1Q14943 382 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 IBA57Q5T440 356 aaKnown RBP6.56□□□□□ -1.36
NUP54-207ENST00000508583 FAM222AQ5U5X8 452 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 ZFAND6Q6FIF0 208 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 CEMP1Q6PRD7 247 aaPredicted RBP6.56□□□□□ -1.36
NUP54-207ENST00000508583 PHLDA1Q8WV24 401 aaPredicted RBP6.56□□□□□ -1.36
NUP54-207ENST00000508583 KCNS1Q96KK3 526 aa6.56□□□□□ -1.36
NUP54-207ENST00000508583 TRBV6-1A0A0K0K1D8 114 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 PFN1P07737 140 aaKnown RBP6.55□□□□□ -1.36
NUP54-207ENST00000508583 BCL2P10415 239 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 ATP5G3P48201 142 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 TCTAP57738 103 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 MEF2BQ02080 365 aaPredicted RBP6.55□□□□□ -1.36
NUP54-207ENST00000508583 DAZ2Q13117 558 aaKnown RBP6.55□□□□□ -1.36
NUP54-207ENST00000508583 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 TDRG1Q3Y452 100 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 Q86TA4 180 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 SDF2L1Q9HCN8 221 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 VAX2Q9UIW0 290 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 KLF12Q9Y4X4 402 aa6.55□□□□□ -1.36
NUP54-207ENST00000508583 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 GCGP01275 180 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 IGLV2-11P01706 119 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 TCL1AP56279 114 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 PRR9Q5T870 116 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 C2CD4CQ8TF44 421 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 FAM210BQ96KR6 192 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 SGK494Q96LW2 274 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 NAGKQ9UJ70 344 aa6.54□□□□□ -1.36
NUP54-207ENST00000508583 DEFB131BA0A096LNP1 70 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 LTAP01374 205 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 AZU1P20160 251 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 LGALS9BQ3B8N2 356 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 FAM162BQ5T6X4 162 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 Q6ZTC4 211 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 COX8CQ7Z4L0 72 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 TMEM183AQ8IXX5 376 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 C11orf52Q96A22 123 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 SMIM12Q96EX1 92 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 LINC00479Q96M42 142 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms