RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ZNF80P51504 273 aaPredicted RBP12.88□□□□□ -0.35
RNF4-209ENST00000507784 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
RNF4-209ENST00000507784 AMTNQ6UX39 209 aa12.88□□□□□ -0.35
RNF4-209ENST00000507784 TRPT1Q86TN4 253 aaKnown RBP12.88□□□□□ -0.35
RNF4-209ENST00000507784 Q8N1Y9 231 aa12.88□□□□□ -0.35
RNF4-209ENST00000507784 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
RNF4-209ENST00000507784 OR10G8Q8NGN5 311 aa12.88□□□□□ -0.35
RNF4-209ENST00000507784 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
RNF4-209ENST00000507784 TRAV12-2A0A075B6T6 113 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 TRBV7-9A0A0J9YWB2 115 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 B4DEV8 164 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 GATCO43716 136 aaKnown RBP12.87□□□□□ -0.35
RNF4-209ENST00000507784 SH2D1AO60880 128 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 MT-ND4LP03901 98 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 CRISP2P16562 243 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 CDKN1BP46527 198 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 CRIP1P50238 77 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 BTN1A1Q13410 526 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 IBA57Q5T440 356 aaKnown RBP12.87□□□□□ -0.35
RNF4-209ENST00000507784 PRR9Q5T870 116 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 LINC00322Q6ZN03 302 aaPredicted RBP12.87□□□□□ -0.35
RNF4-209ENST00000507784 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 NUDT10Q8NFP7 164 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 NUDT11Q96G61 164 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 SFRP2Q96HF1 295 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
RNF4-209ENST00000507784 A8MTW9 85 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 FABP5P3A8MUU1 101 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 RNF212Q495C1 297 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 FAM162BQ5T6X4 162 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 ATRAIDQ6UW56 229 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 CLUHP3Q96NS8 147 aa12.86□□□□□ -0.35
RNF4-209ENST00000507784 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
RNF4-209ENST00000507784 C7orf71A4D174 169 aa12.85□□□□□ -0.35
RNF4-209ENST00000507784 ZNF705GA8MUZ8 300 aaPredicted RBP12.85□□□□□ -0.35
RNF4-209ENST00000507784 P01737 135 aa12.85□□□□□ -0.35
RNF4-209ENST00000507784 NUTF2P61970 127 aaKnown RBP12.85□□□□□ -0.35
RNF4-209ENST00000507784 RHEBQ15382 184 aa12.85□□□□□ -0.35
RNF4-209ENST00000507784 OSTCQ9NRP0 149 aa12.85□□□□□ -0.35
RNF4-209ENST00000507784 NOTCH3Q9UM47 2321 aa12.85□□□□□ -0.35
RNF4-209ENST00000507784 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 KLLNB2CW77 178 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 PPP1R2P9O14990 202 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 ORM1P02763 201 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
RNF4-209ENST00000507784 TMEM189A5PLL7 270 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 H7BYZ3 331 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 AMBPP02760 352 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 PFN1P07737 140 aaKnown RBP12.83□□□□□ -0.36
RNF4-209ENST00000507784 GFI1BQ5VTD9 330 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
RNF4-209ENST00000507784 Q6ZQT7 251 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 NAGKQ9UJ70 344 aa12.83□□□□□ -0.36
RNF4-209ENST00000507784 TMSB15BA0A087X1C1 80 aa12.82□□□□□ -0.36
RNF4-209ENST00000507784 LOC102724200A0A096LPH7 203 aaPredicted RBP12.82□□□□□ -0.36
RNF4-209ENST00000507784 OR2D3Q8NGH3 330 aa12.82□□□□□ -0.36
RNF4-209ENST00000507784 CTDSP1Q9GZU7 261 aa12.82□□□□□ -0.36
RNF4-209ENST00000507784 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
RNF4-209ENST00000507784 RPL19P84098 196 aaKnown RBP12.81□□□□□ -0.36
RNF4-209ENST00000507784 MUC21Q5SSG8 566 aa12.81□□□□□ -0.36
RNF4-209ENST00000507784 Q6AWC8 147 aa12.81□□□□□ -0.36
RNF4-209ENST00000507784 A0A087WWC5 75 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
RNF4-209ENST00000507784 SCO1O75880 301 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 INSP01308 110 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 V9GYV3 84 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
RNF4-209ENST00000507784 CA1P00915 261 aaPredicted RBP12.79□□□□□ -0.36
RNF4-209ENST00000507784 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
RNF4-209ENST00000507784 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
RNF4-209ENST00000507784 CMYA5Q8N3K9 4069 aa12.79□□□□□ -0.36
RNF4-209ENST00000507784 ANK2Q01484 3957 aa12.79□□□□□ -0.36
RNF4-209ENST00000507784 GRIFINA4D1Z8 144 aa12.78□□□□□ -0.36
RNF4-209ENST00000507784 ZNF324O75467 553 aaPredicted RBP12.78□□□□□ -0.36
RNF4-209ENST00000507784 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
RNF4-209ENST00000507784 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
RNF4-209ENST00000507784 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
RNF4-209ENST00000507784 FAM159AQ6UWV7 190 aa12.78□□□□□ -0.36
RNF4-209ENST00000507784 LINC01587Q99440 93 aa12.78□□□□□ -0.36
RNF4-209ENST00000507784 TMEM208Q9BTX3 173 aa12.78□□□□□ -0.36
RNF4-209ENST00000507784 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
RNF4-209ENST00000507784 A8MWL6 223 aa12.77□□□□□ -0.37
RNF4-209ENST00000507784 GZMBP10144 247 aa12.77□□□□□ -0.37
RNF4-209ENST00000507784 APOC4P55056 127 aa12.77□□□□□ -0.37
RNF4-209ENST00000507784 LINC01559Q495D7 138 aa12.77□□□□□ -0.37
RNF4-209ENST00000507784 IL36BQ9NZH7 164 aa12.77□□□□□ -0.37
RNF4-209ENST00000507784 IGHV1OR15-1A0A075B7D0 117 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 XKRY2A2RUG3 117 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 RBMY1A1P0DJD3 496 aaKnown RBP12.76□□□□□ -0.37
RNF4-209ENST00000507784 RBMY1CP0DJD4 496 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 HTN1P15515 57 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms