RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ERG28Q9UKR5 140 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 K7EMI3 77 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 TNFRSF13BO14836 293 aaPredicted RBP12.39□□□□□ -0.43
SCLT1-208ENST00000506368 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 AMTNQ6UX39 209 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 C20orf78Q9BR46 151 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 NAV3Q8IVL0 2385 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 PRRG2O14669 202 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 SLC25A16P16260 332 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 Q6ZUT4 128 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 TRBV20-1A0A075B6N2 111 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 ZNF672Q499Z4 452 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-208ENST00000506368 MORN3Q6PF18 240 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-208ENST00000506368 IGFL3Q6UXB1 125 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 IL17RELQ6ZVW7 336 aa12.38□□□□□ -0.43
SCLT1-208ENST00000506368 BBC3Q96PG8 261 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-208ENST00000506368 SPTA1P02549 2419 aa12.37□□□□□ -0.43
SCLT1-208ENST00000506368 TMEM178BH3BS89 294 aa12.37□□□□□ -0.43
SCLT1-208ENST00000506368 ASCL2Q99929 193 aa12.37□□□□□ -0.43
SCLT1-208ENST00000506368 IGHV1-3A0A0C4DH29 117 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 LOXP28300 417 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-208ENST00000506368 INSL3P51460 131 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 TEN1Q86WV5 123 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 SPANXA1Q9NS26 97 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 CHD6Q8TD26 2715 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 SVILO95425 2214 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 ORM1P02763 201 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 DTX2Q86UW9 622 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 IGFBPL1Q8WX77 278 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
SCLT1-208ENST00000506368 M0QXV9 152 aa12.35□□□□□ -0.43
SCLT1-208ENST00000506368 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
SCLT1-208ENST00000506368 Q8NA96 180 aa12.35□□□□□ -0.43
SCLT1-208ENST00000506368 PSMG3-AS1Q96PY0 264 aa12.35□□□□□ -0.43
SCLT1-208ENST00000506368 COL6A6A6NMZ7 2263 aa12.35□□□□□ -0.43
SCLT1-208ENST00000506368 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 PRB1P04280 392 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 APELAP0DMC3 54 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 UBE2D1P51668 147 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 UBE2D3P61077 147 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 UBE2D2P62837 147 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 PRR30Q53SZ7 412 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-208ENST00000506368 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 IGKV2-40A0A087WW87 121 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-208ENST00000506368 FCN3O75636 299 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 IGKV2D-40P01614 121 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-208ENST00000506368 CNTFRP26992 372 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 MFAP4P55083 255 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
SCLT1-208ENST00000506368 SMCPP49901 116 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-208ENST00000506368 ZNF80P51504 273 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-208ENST00000506368 CCL8P80075 99 aa12.33□□□□□ -0.44
SCLT1-208ENST00000506368 SEM1Q6ZVN7 128 aa12.33□□□□□ -0.44
SCLT1-208ENST00000506368 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
SCLT1-208ENST00000506368 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
SCLT1-208ENST00000506368 IGHV4-4A0A075B6R2 117 aa12.33□□□□□ -0.44
SCLT1-208ENST00000506368 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
SCLT1-208ENST00000506368 CNIH1O95406 144 aa12.32□□□□□ -0.44
SCLT1-208ENST00000506368 GAGE5Q13069 117 aa12.32□□□□□ -0.44
SCLT1-208ENST00000506368 GAGE6Q13070 117 aa12.32□□□□□ -0.44
SCLT1-208ENST00000506368 NRACQ8N912 160 aa12.32□□□□□ -0.44
SCLT1-208ENST00000506368 MSRB1Q9NZV6 116 aa12.32□□□□□ -0.44
SCLT1-208ENST00000506368 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 MT-ATP8P03928 68 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 LGALS1P09382 135 aaKnown RBP12.31□□□□□ -0.44
SCLT1-208ENST00000506368 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 ZFAND6Q6FIF0 208 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 NDUFA3O95167 84 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 XGP55808 180 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 ANAPC13Q9BS18 74 aa12.31□□□□□ -0.44
SCLT1-208ENST00000506368 TMEM78Q5T7P6 136 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 GFRALQ6UXV0 394 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 SLC50A1Q9BRV3 221 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 A8MWV9 139 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 ASIPP42127 132 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 KLRB1Q12918 225 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 PAPPA-AS1Q5QFB9 102 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 TEX29Q8N6K0 151 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 CTSZQ9UBR2 303 aa12.3□□□□□ -0.44
SCLT1-208ENST00000506368 NBASA2RRP1 2371 aa12.29□□□□□ -0.44
SCLT1-208ENST00000506368 LYPD2Q6UXB3 125 aa12.29□□□□□ -0.44
SCLT1-208ENST00000506368 NEXN-AS1Q8NBZ9 246 aa12.29□□□□□ -0.44
SCLT1-208ENST00000506368 TOMM6Q96B49 74 aa12.29□□□□□ -0.44
SCLT1-208ENST00000506368 GAS8-AS1O95177 125 aa12.28□□□□□ -0.44
SCLT1-208ENST00000506368 PSMB2P49721 201 aa12.28□□□□□ -0.44
SCLT1-208ENST00000506368 Q8TAT8 98 aa12.28□□□□□ -0.44
SCLT1-208ENST00000506368 SMIM2Q9BVW6 85 aa12.28□□□□□ -0.44
SCLT1-208ENST00000506368 HIF1ANQ9NWT6 349 aa12.28□□□□□ -0.44
SCLT1-208ENST00000506368 IGLV11-55A0A075B6I3 123 aa12.28□□□□□ -0.44
SCLT1-208ENST00000506368 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
SCLT1-208ENST00000506368 ZGRF1Q86YA3 2104 aa12.27□□□□□ -0.44
SCLT1-208ENST00000506368 ADIPOQQ15848 244 aa12.27□□□□□ -0.45
SCLT1-208ENST00000506368 RNF183Q96D59 192 aa12.27□□□□□ -0.45
SCLT1-208ENST00000506368 GATA1P15976 413 aaPredicted RBP12.26□□□□□ -0.45
SCLT1-208ENST00000506368 SRD5A1P18405 259 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms