RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PROSCO94903 275 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 P0C880 135 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 UBE2G1P62253 170 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 ETDBQ3ZM63 59 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 NLRP1Q9C000 1473 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 ARHGAP32A7KAX9 2087 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 GLI3P10071 1580 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 GOLGA3Q08378 1498 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 CCDC88BA6NC98 1476 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 DOCK2Q92608 1830 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 ZNF705FA8MVS1 300 aaPredicted RBP3.34□□□□□ -1.87
NIPBL-204ENST00000504430 NFYAP23511 347 aaPredicted RBP3.34□□□□□ -1.87
NIPBL-204ENST00000504430 ESRGQ1W209 222 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 COPS9Q8WXC6 57 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 MCEEQ96PE7 176 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 A8MU10 97 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
NIPBL-204ENST00000504430 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
NIPBL-204ENST00000504430 MGAMO43451 1857 aa3.34□□□□□ -1.88
NIPBL-204ENST00000504430 ZFHX2Q9C0A1 2572 aaPredicted RBP3.34□□□□□ -1.88
NIPBL-204ENST00000504430 WFDC2Q14508 124 aa3.34□□□□□ -1.88
NIPBL-204ENST00000504430 NNATQ16517 81 aa3.34□□□□□ -1.88
NIPBL-204ENST00000504430 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.88
NIPBL-204ENST00000504430 CXCL16Q9H2A7 254 aa3.34□□□□□ -1.88
NIPBL-204ENST00000504430 EXPH5Q8NEV8 1989 aa3.34□□□□□ -1.88
NIPBL-204ENST00000504430 UNC13CQ8NB66 2214 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 TRAV7A0A075B6U4 112 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 A0A096LNJ9 63 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 G3V3Q6 166 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 IGKCP01834 107 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 LINC00612Q8N6U2 182 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 CASZ1Q86V15 1759 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 MPDZO75970 2070 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 F8W1H4 67 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.33□□□□□ -1.88
NIPBL-204ENST00000504430 LYPD6Q86Y78 171 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 TIMM9Q9Y5J7 89 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 DIP2BQ9P265 1576 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 C10orf71Q711Q0 1435 aa3.33□□□□□ -1.88
NIPBL-204ENST00000504430 E7EQL1 145 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 PANO1I0J062 215 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 SPCS1Q9Y6A9 102 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 MAGI2Q86UL8 1455 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 PLXNA4Q9HCM2 1894 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 BAZ2BQ9UIF8 2168 aaKnown RBP3.32□□□□□ -1.88
NIPBL-204ENST00000504430 EPRSP07814 1512 aaKnown RBP3.32□□□□□ -1.88
NIPBL-204ENST00000504430 SHANK3Q9BYB0 1731 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 PIK3C2AO00443 1686 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 CFDP00746 253 aaPredicted RBP3.32□□□□□ -1.88
NIPBL-204ENST00000504430 CCKP06307 115 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 HMGA2P52926 109 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 GNG11P61952 73 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 RNF5Q99942 180 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 TMEM14AQ9Y6G1 99 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 FREM3P0C091 2139 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 PTPRFP10586 1907 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 UBE2L5PA0A1B0GUS4 154 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 J3QLW9 94 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 RPL26P61254 145 aaKnown RBP3.32□□□□□ -1.88
NIPBL-204ENST00000504430 UBE2L3P68036 154 aaKnown RBP3.32□□□□□ -1.88
NIPBL-204ENST00000504430 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 SPANXDQ9BXN6 97 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 PLXNA2O75051 1894 aa3.32□□□□□ -1.88
NIPBL-204ENST00000504430 TRBV6-6A0A0A6YYG2 114 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 M0R233 179 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 SSR2P43308 183 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 NDPQ00604 133 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 SMDT1Q9H4I9 107 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 PRR14LQ5THK1 2151 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 RNASE2P10153 161 aaKnown RBP3.31□□□□□ -1.88
NIPBL-204ENST00000504430 SLC25A26Q70HW3 274 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 RTEL1-TNFRSF6BF6WH68 1400 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 SPTBP11277 2137 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 IGLC2P0DOY2 106 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 IGLC3P0DOY3 106 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 ANK1P16157 1881 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 RHOHQ15669 191 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
NIPBL-204ENST00000504430 TRPM1Q7Z4N2 1603 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 MYH4Q9Y623 1939 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 UACAQ9BZF9 1416 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 KRTAP4-8A0A0G2JLE6 195 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 COL8A2P25067 703 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 SFTA2Q6UW10 78 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 LINC00269Q8N2A0 174 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 OR8B3Q8NGG8 313 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 OR8B2Q96RD0 313 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 POLA1P09884 1462 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-204ENST00000504430 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 SAA1P0DJI8 122 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-204ENST00000504430 HIGD2BQ4VC39 106 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 FYCO1Q9BQS8 1478 aa3.3□□□□□ -1.88
NIPBL-204ENST00000504430 TRAV17A0A0B4J275 112 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 H7C2G1 150 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 IMMP1LQ96LU5 166 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms