RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FAAP20Q6NZ36 180 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 YIPF6Q96EC8 236 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
LSM6-204ENST00000504181 ANKRD65E5RJM6 399 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 COX7A2P2O60397 106 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 ZNF253O75346 499 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 RAB3DO95716 219 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 SEC11BP0C7V7 166 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 TBPP20226 339 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 RPL19P84098 196 aaKnown RBP7.83□□□□□ -1.16
LSM6-204ENST00000504181 SLC38A11Q08AI6 406 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 RAB31Q13636 194 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 GUK1Q16774 197 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 CROCCP3Q8IVE0 287 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 OR51S1Q8NGJ8 323 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 OR52I2Q8NH67 350 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 GTSF1Q8WW33 167 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 RNF185Q96GF1 192 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 CIB3Q96Q77 187 aaPredicted RBP7.83□□□□□ -1.16
LSM6-204ENST00000504181 C1orf43Q9BWL3 253 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 VAX2Q9UIW0 290 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 KCNIP3Q9Y2W7 256 aa7.83□□□□□ -1.16
LSM6-204ENST00000504181 MED6O75586 246 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 RRAS2P62070 204 aaPredicted RBP7.82□□□□□ -1.16
LSM6-204ENST00000504181 FAM159AQ6UWV7 190 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 Q8TAT8 98 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 SH3BGRL3Q9H299 93 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 COMMD3Q9UBI1 195 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 GPR132Q9UNW8 380 aa7.82□□□□□ -1.16
LSM6-204ENST00000504181 GAGE12JA6NER3 117 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 AGPAT2O15120 278 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 SYNGR2O43760 224 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 GAGE1Q13065 139 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 GAGE4Q13068 117 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 GAGE5Q13069 117 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 GAGE13Q4V321 117 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 PXDC1Q5TGL8 231 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 SPACA4Q8TDM5 124 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 RAB2BQ8WUD1 216 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 NAGKQ9UJ70 344 aa7.81□□□□□ -1.16
LSM6-204ENST00000504181 STRAPQ9Y3F4 350 aaKnown RBP7.81□□□□□ -1.16
LSM6-204ENST00000504181 H7C1H1 209 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 GOSR2O14653 212 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 APOA1P02647 267 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 RPS19P39019 145 aaKnown RBP7.8□□□□□ -1.16
LSM6-204ENST00000504181 SURF2Q15527 256 aaPredicted RBP7.8□□□□□ -1.16
LSM6-204ENST00000504181 PRR4Q16378 134 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 C10orf113Q5VZT2 155 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 ZNF546Q86UE3 836 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 EXOC3-AS1Q8N2X6 119 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 TMEM229BQ8NBD8 167 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 CNBD2Q96M20 576 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 MTFP1Q9UDX5 166 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 PRELID1Q9Y255 219 aa7.8□□□□□ -1.16
LSM6-204ENST00000504181 TRBV19A0A075B6N1 114 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 K7EPK0 472 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 TAAR5O14804 337 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 GNRH2O43555 120 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 HIST1H1EP10412 219 aaKnown RBP7.79□□□□□ -1.16
LSM6-204ENST00000504181 TAS2R19P59542 299 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 Q0VG73 95 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 CYB561D1Q8N8Q1 229 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 SOSTQ9BQB4 213 aa7.79□□□□□ -1.16
LSM6-204ENST00000504181 A0A087WWC5 75 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 A0A087WX48 190 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 NDUFB4O95168 129 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 LINC00694P0DN24 101 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 ZNF138P52744 262 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 GABARAPL2P60520 117 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 ELOBQ15370 118 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 NPVFQ9HCQ7 196 aa7.78□□□□□ -1.16
LSM6-204ENST00000504181 HPGDSO60760 199 aa7.77□□□□□ -1.17
LSM6-204ENST00000504181 ZNF266Q14584 549 aa7.77□□□□□ -1.17
LSM6-204ENST00000504181 Q6AWC8 147 aa7.77□□□□□ -1.17
LSM6-204ENST00000504181 ENHOQ6UWT2 76 aa7.77□□□□□ -1.17
LSM6-204ENST00000504181 TIMM9Q9Y5J7 89 aa7.77□□□□□ -1.17
LSM6-204ENST00000504181 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 FAM231BA6NCW3 169 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 PGPA6NDG6 321 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 A6NHS1 94 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 DISC1C4P0D8 188 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 CRPP02741 224 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
LSM6-204ENST00000504181 INPP1P49441 399 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 SRSF9Q13242 221 aaKnown RBP eCLIP7.76□□□□□ -1.17
LSM6-204ENST00000504181 LYPD6BQ8NI32 183 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
LSM6-204ENST00000504181 CCDC59Q9P031 241 aaKnown RBP7.76□□□□□ -1.17
LSM6-204ENST00000504181 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 CIDEAO60543 219 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 TYMSP04818 313 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 ANXA3P12429 323 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 SRPXP78539 464 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 ZNF876PQ49A33 203 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 KCNIP4Q6PIL6 250 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms