RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 A0A0J9YX75 114 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 TINCRA0A1B0GVN0 87 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 NDUFA3O95167 84 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 PLAUP00749 431 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 GHRHP01286 108 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 COX6CP09669 75 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 COX6A1P12074 109 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 FXYD7P58549 80 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 ERCC8Q13216 396 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 MLANAQ16655 118 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 RPL39P5Q59GN2 51 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 C19orf54Q5BKX5 351 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 FAM201AQ5SY85 155 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 GGNQ86UU5 652 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 MDP1Q86V88 176 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 TMEM167AQ8TBQ9 72 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 METTL26Q96S19 204 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 CXXC4Q9H2H0 198 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 JPT2Q9H910 190 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 X6R8D5 127 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 RP1P56715 2156 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 RTTNQ86VV8 2226 aa4.62□□□□□ -1.67
LINC01340-201ENST00000504012 DYSFO75923 2080 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 IGHV4-4A0A075B6R2 117 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 IGHV1-69DA0A0B4J2H0 117 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 H7C423 109 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 TM4SF5O14894 197 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 SH2D1AO60880 128 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 MRPL33O75394 65 aaKnown RBP4.61□□□□□ -1.67
LINC01340-201ENST00000504012 NDUFC2O95298 119 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 IGHV3-13P01766 116 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 CRIP2P52943 208 aaPredicted RBP4.61□□□□□ -1.67
LINC01340-201ENST00000504012 HOXA4Q00056 320 aaPredicted RBP4.61□□□□□ -1.67
LINC01340-201ENST00000504012 TCF15Q12870 199 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 FAM53AQ6NSI3 398 aaPredicted RBP4.61□□□□□ -1.67
LINC01340-201ENST00000504012 PRIMA1Q86XR5 153 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 DAND5Q8N907 189 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 Q8NA96 180 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 PSMG3-AS1Q96PY0 264 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 UPK3BQ9BT76 320 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 PROK2Q9HC23 129 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 DYNLRB1Q9NP97 96 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 PYGO1Q9Y3Y4 419 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 TET1Q8NFU7 2136 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 UNC13CQ8NB66 2214 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 ZNF407Q9C0G0 2248 aa4.61□□□□□ -1.67
LINC01340-201ENST00000504012 PRRC2BQ5JSZ5 2229 aaKnown RBP4.6□□□□□ -1.67
LINC01340-201ENST00000504012 IGHV3-43A0A0B4J1X8 118 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 TRAV13-1A0A0B4J241 112 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 IGHV3-20A0A0C4DH32 117 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 C11orf86A6NJI1 115 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 DEFB108AA8MXU0 73 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 SMKR1H3BMG3 65 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 CDX4O14627 284 aaPredicted RBP4.6□□□□□ -1.67
LINC01340-201ENST00000504012 WNT9BO14905 357 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 CXCL13O43927 109 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 PPP1R17O96001 155 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 IGHV3-43DP0DP04 118 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 GFERP55789 205 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 HES3Q5TGS1 186 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 GUSBP11Q6P575 273 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 DUX4L9Q6RFH8 374 aaPredicted RBP4.6□□□□□ -1.67
LINC01340-201ENST00000504012 ASCL5Q7RTU5 278 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 NRACQ8N912 160 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 SCGB3A1Q96QR1 104 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 SHANK2-AS3Q9BTD1 123 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 TPSG1Q9NRR2 321 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 LINC00527Q9UJ94 153 aa4.6□□□□□ -1.67
LINC01340-201ENST00000504012 TMEM223A0PJW6 202 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 SDHAF1A6NFY7 115 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 LST1O00453 97 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 BCE1O60756 84 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 SAA1P0DJI8 122 aaPredicted RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 SAA2P0DJI9 122 aaPredicted RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 WT1P19544 449 aaPredicted RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 RPL18AQ02543 176 aaKnown RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 KLRB1Q12918 225 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 ESPL1Q14674 2120 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 LTBP2Q14767 1821 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 CEMP1Q6PRD7 247 aaPredicted RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 C3orf56Q8N813 242 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 KLF14Q8TD94 323 aaPredicted RBP4.59□□□□□ -1.67
LINC01340-201ENST00000504012 DCANP1Q8TF63 244 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 COPS9Q8WXC6 57 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 VKORC1Q9BQB6 163 aa4.59□□□□□ -1.67
LINC01340-201ENST00000504012 GON4LQ3T8J9 2241 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 TRAV12-2A0A075B6T6 113 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.58□□□□□ -1.68
LINC01340-201ENST00000504012 LY6LH3BQJ8 138 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 H3BRN7 92 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 M0R381 172 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 IGLV3-19P01714 112 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 EGR2P11161 476 aaPredicted RBP4.58□□□□□ -1.68
LINC01340-201ENST00000504012 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
LINC01340-201ENST00000504012 SSR4P51571 173 aa4.58□□□□□ -1.68
LINC01340-201ENST00000504012 MRPS21P82921 87 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms