RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 HIST1H2BBP33778 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST1H2BDP58876 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 CXCR4P61073 352 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST1H2BCP62807 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 EIF3IQ13347 325 aaKnown RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 RHEBQ15382 184 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 GRK1Q15835 563 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST2H2BEQ16778 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 KHDC3LQ587J8 217 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 C1orf137Q5JT78 98 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 SAPCD1Q5SSQ6 148 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 C1orf194Q5T5A4 169 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 AADACL3Q5VUY0 350 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 AADACL4Q5VUY2 407 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 RPL22L1Q6P5R6 122 aaKnown RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 LINC00322Q6ZN03 302 aaPredicted RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 LCA10Q71F78 164 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 MIR17HGQ75NE6 70 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 BPIFA4PQ86YQ2 179 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 PDZD9Q8IXQ8 264 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 ATOH7Q8N100 152 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 Q8N402 240 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 RIBC1Q8N443 379 aaPredicted RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 PLPP5Q8NEB5 264 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 OR5A1Q8NGJ0 315 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 OR13C4Q8NGS5 318 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 OR2T4Q8NH00 348 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 OR10AC1Q8NH08 325 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 PFN4Q8NHR9 129 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 TEX47Q8TBZ9 253 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 EEF1AKMT1Q8WVE0 214 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST1H2BHQ93079 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 DIRAS2Q96HU8 199 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 CNBD2Q96M20 576 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 KCTD7Q96MP8 289 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST1H2BNQ99877 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 HIST1H2BMQ99879 126 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 DCUN1D5Q9BTE7 237 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 DERL1Q9BUN8 251 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 TMEM147Q9BVK8 224 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 DERL2Q9GZP9 239 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 DCSTAMPQ9H295 470 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 CHMP4BQ9H444 224 aaKnown RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 EFCAB1Q9HAE3 211 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 CDC42SE1Q9NRR8 79 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 AGPAT3Q9NRZ7 376 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 PAQR5Q9NXK6 330 aaPredicted RBP-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 TNFSF18Q9UNG2 199 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 SLC35A3Q9Y2D2 325 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 COQ4Q9Y3A0 265 aa-0.03□□□□□ -2.41
SGMS1-205ENST00000498514 TRAV1-1A0A0B4J248 108 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 A0A0J9YY10 115 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TINCRA0A1B0GVN0 87 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TRBV6-4A0A1B0GX49 114 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 A0A1B0GX78 115 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 PQLC2LA1A4F0 135 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 C7orf71A4D174 169 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 ARL5CA6NH57 179 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 EEF1E1-BLOC1S5C9J1V9 151 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 PFDN6O15212 129 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 BIRC5O15392 142 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 NUPR1O60356 82 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 ADAP1O75689 374 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 LYZL6O75951 148 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 MT1EP04732 61 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 CRHP06850 196 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 OCMP0CE72 109 aaPredicted RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 MGST1P10620 155 aaKnown RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 SSR2P43308 183 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 MARCKSL1P49006 195 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 NKX2-5P52952 324 aaPredicted RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 CLDN12P56749 244 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 RPL37AP61513 92 aaKnown RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 HBA1P69905 142 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 MT1XP80297 61 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 WFDC2Q14508 124 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 GUK1Q16774 197 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 DEFB136Q30KP8 78 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 RNASE10Q5GAN6 216 aaKnown RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 COQ5Q5HYK3 327 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 CDKL4Q5MAI5 379 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 KRTAP26-1Q6PEX3 210 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 C2orf82Q6UX34 121 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TRAPPC6BQ86SZ2 158 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 C20orf196Q8IYI0 205 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 HIST3H2BBQ8N257 126 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 LRRC25Q8N386 305 aaPredicted RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 DEFB125Q8N687 156 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TMEM161BQ8NDZ6 487 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 OR10J5Q8NHC4 309 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TERB2Q8NHR7 220 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 MRPL30Q8TCC3 161 aaKnown RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 DNAJC9Q8WXX5 260 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 CMTM5Q96DZ9 223 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TSPAN32Q96QS1 320 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 C6orf62Q9GZU0 229 aaPredicted RBP-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 TLNRD1Q9H1K6 362 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 MAP1LC3AQ9H492 121 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 SLC39A9Q9NUM3 307 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms