RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	GCG	P01275	180 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	CT45A10	P0DMU9	189 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	HLA-DRB4	P13762	266 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	CASC10	Q5T4H9	136 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	FAM19A4	Q96LR4	140 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	C19orf73	Q9NVV2	129 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	HLA-DRB4	X5D2U9	266 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	SACS	Q9NZJ4	4579 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101		B4DEV8	164 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101		M0R036	132 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	CD7	P09564	240 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	NHLRC2	Q8NBF2	726 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	ISOC2	Q96AB3	205 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	CLUHP3	Q96NS8	147 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	ODF3	Q96PU9	254 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	BIN3	Q9NQY0	253 aa		13.39	□□□□□ -0.27
SRM-206	ENST00000490101	KNCN	A6PVL3	124 aa		13.38	□□□□□ -0.27
SRM-206	ENST00000490101		H3BMM0	161 aa		13.38	□□□□□ -0.27
SRM-206	ENST00000490101	MGST1	P10620	155 aa	Known RBP	13.38	□□□□□ -0.27
SRM-206	ENST00000490101	ACTL10	Q5JWF8	245 aa		13.38	□□□□□ -0.27
SRM-206	ENST00000490101	APRG1	Q8IVJ8	170 aa		13.38	□□□□□ -0.27
SRM-206	ENST00000490101	IGHV4-30-4	P0DP06	118 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	CRISP2	P16562	243 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	RHEB	Q15382	184 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	ZNF124	Q15973	351 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	SMUG1	Q53HV7	270 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	ZC2HC1A	Q96GY0	325 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	C8orf49	Q96NF6	230 aa		13.37	□□□□□ -0.27
SRM-206	ENST00000490101	C7orf77	A4D0Y5	90 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101	OR5I1	Q13606	314 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101	AMTN	Q6UX39	209 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101	GTSCR1	Q86UQ5	136 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101		Q8N1Y9	231 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101	ZFAND2A	Q8N6M9	145 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101	CSMD3	Q7Z407	3707 aa		13.36	□□□□□ -0.27
SRM-206	ENST00000490101	MT-ND4L	P03901	98 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	LEP	P41159	167 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	ZFAND6	Q6FIF0	208 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	ATRAID	Q6UW56	229 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	FAM231D	Q6ZW35	169 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	OR4B1	Q8NGF8	309 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	OSTC	Q9NRP0	149 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	AGRN	O00468	2067 aa		13.35	□□□□□ -0.27
SRM-206	ENST00000490101	STARD9	Q9P2P6	4700 aa		13.34	□□□□□ -0.27
SRM-206	ENST00000490101		A0A087WWC5	75 aa		13.34	□□□□□ -0.27
SRM-206	ENST00000490101	C19orf71	A6NCJ1	209 aa		13.34	□□□□□ -0.27
SRM-206	ENST00000490101	CRIP1	P50238	77 aa		13.34	□□□□□ -0.27
SRM-206	ENST00000490101	SFRP2	Q96HF1	295 aa		13.34	□□□□□ -0.27
SRM-206	ENST00000490101	LYST	Q99698	3801 aa		13.33	□□□□□ -0.27
SRM-206	ENST00000490101	IGKV3-20	P01619	116 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	TSPO	P30536	169 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	RNF212	Q495C1	297 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	PRR27	Q6MZM9	219 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.33	□□□□□ -0.28
SRM-206	ENST00000490101	TRPT1	Q86TN4	253 aa	Known RBP	13.33	□□□□□ -0.28
SRM-206	ENST00000490101	STH	Q8IWL8	128 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	TM2D3	Q9BRN9	247 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	CTDSP1	Q9GZU7	261 aa		13.33	□□□□□ -0.28
SRM-206	ENST00000490101	RBMY1B	A6NDE4	496 aa	Known RBP	13.32	□□□□□ -0.28
SRM-206	ENST00000490101	RBMY1E	A6NEQ0	496 aa	Known RBP	13.32	□□□□□ -0.28
SRM-206	ENST00000490101	KLLN	B2CW77	178 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	PPP1R2P9	O14990	202 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	RBMY1D	P0C7P1	496 aa	Known RBP	13.32	□□□□□ -0.28
SRM-206	ENST00000490101	ZNF80	P51504	273 aa	Predicted RBP	13.32	□□□□□ -0.28
SRM-206	ENST00000490101	FAM162B	Q5T6X4	162 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	C15orf54	Q8N8G6	183 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	NUDT10	Q8NFP7	164 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	OR10G8	Q8NGN5	311 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	ANAPC16	Q96DE5	110 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	NUDT11	Q96G61	164 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	RPS10P5	Q9NQ39	176 aa		13.32	□□□□□ -0.28
SRM-206	ENST00000490101	FABP5P3	A8MUU1	101 aa		13.31	□□□□□ -0.28
SRM-206	ENST00000490101	GPX1	P07203	203 aa		13.31	□□□□□ -0.28
SRM-206	ENST00000490101	ERVFC1-1	P60608	527 aa		13.31	□□□□□ -0.28
SRM-206	ENST00000490101	IBA57	Q5T440	356 aa	Known RBP	13.31	□□□□□ -0.28
SRM-206	ENST00000490101	PRR9	Q5T870	116 aa		13.31	□□□□□ -0.28
SRM-206	ENST00000490101	DAZAP1	Q96EP5	407 aa	Known RBP	13.31	□□□□□ -0.28
SRM-206	ENST00000490101	RNASE7	Q9H1E1	156 aa	Known RBP	13.31	□□□□□ -0.28
SRM-206	ENST00000490101	WFDC10A	Q9H1F0	79 aa		13.31	□□□□□ -0.28
SRM-206	ENST00000490101	TMEM242	Q9NWH2	141 aa		13.31	□□□□□ -0.28
SRM-206	ENST00000490101	SH2D1A	O60880	128 aa		13.3	□□□□□ -0.28
SRM-206	ENST00000490101	CDKN1B	P46527	198 aa		13.3	□□□□□ -0.28
SRM-206	ENST00000490101	DEFB125	Q8N687	156 aa		13.3	□□□□□ -0.28
SRM-206	ENST00000490101		A8MZ25	164 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101		H7BYZ3	331 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101	GATC	O43716	136 aa	Known RBP	13.29	□□□□□ -0.28
SRM-206	ENST00000490101		P01737	135 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101	AMBP	P02760	352 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101	PFN1	P07737	140 aa	Known RBP	13.29	□□□□□ -0.28
SRM-206	ENST00000490101		Q6AWC8	147 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101	TUBA4B	Q9H853	241 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101		V9GYV3	84 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101	DNAH1	Q9P2D7	4330 aa		13.29	□□□□□ -0.28
SRM-206	ENST00000490101	C7orf71	A4D174	169 aa		13.28	□□□□□ -0.28
SRM-206	ENST00000490101		M0R2Z0	102 aa		13.28	□□□□□ -0.28
SRM-206	ENST00000490101	RNASE4	P34096	147 aa	Known RBP	13.28	□□□□□ -0.28
SRM-206	ENST00000490101	KIR3DS1	Q14943	382 aa		13.28	□□□□□ -0.28
SRM-206	ENST00000490101	SPINK13	Q1W4C9	94 aa		13.28	□□□□□ -0.28
SRM-206	ENST00000490101	SPATA25	Q9BR10	227 aa		13.28	□□□□□ -0.28
SRM-206	ENST00000490101	TRAV21	A0A0B4J279	112 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms