RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 CHCHD1Q96BP2 118 aaKnown RBP3.28□□□□□ -1.88
CTNNB1-215ENST00000488914 LINC01600Q96MT4 127 aa3.28□□□□□ -1.88
CTNNB1-215ENST00000488914 PLA2G12AQ9BZM1 189 aa3.28□□□□□ -1.88
CTNNB1-215ENST00000488914 MYH7BA7E2Y1 1941 aa3.28□□□□□ -1.88
CTNNB1-215ENST00000488914 PLXNC1O60486 1568 aa3.28□□□□□ -1.88
CTNNB1-215ENST00000488914 KIF13AQ9H1H9 1805 aa3.28□□□□□ -1.88
CTNNB1-215ENST00000488914 KIF1AQ12756 1690 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 ZNF638Q14966 1978 aaKnown RBP3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 IQGAP3Q86VI3 1631 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 DIP2CQ9Y2E4 1556 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 TRAV2A0A0B4J234 112 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 CCL16O15467 120 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 LYRM1O43325 122 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 PEBP1P30086 187 aaKnown RBP3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 KLHL30-AS1Q8NEE0 82 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 OR8B3Q8NGG8 313 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 PFN4Q8NHR9 129 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 OR8B2Q96RD0 313 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 TTTY13Q9BZ97 58 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 CXCL16Q9H2A7 254 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 ABCC1P33527 1531 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 CDK13Q14004 1512 aaKnown RBP3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 CDK12Q9NYV4 1490 aaPredicted RBP3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 CROCC2H7BZ55 1655 aa3.27□□□□□ -1.89
CTNNB1-215ENST00000488914 ABCA6Q8N139 1617 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 TIAM1Q13009 1591 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 STRCQ7RTU9 1775 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 IGHV3-49A0A0A0MS15 119 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 IGHV1-24A0A0C4DH33 117 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 BPY2O14599 106 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 IGHV1-69P01742 117 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 CGB3P0DN86 165 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 CGB7P0DN87 165 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 Q1T7F1 81 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 MPV17LQ2QL34 196 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 ZFP2Q6ZN57 461 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 SMIM5Q71RC9 77 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 Q8N976 141 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 CMTM2Q8TAZ6 248 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 NXT2Q9NPJ8 142 aaKnown RBP3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 PTPRFP10586 1907 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 MYH1P12882 1939 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 MYH6P13533 1939 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 ANK1P16157 1881 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 KIF14Q15058 1648 aa3.26□□□□□ -1.89
CTNNB1-215ENST00000488914 SCN11AQ9UI33 1791 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 DISP1Q96F81 1524 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 PEAK1Q9H792 1746 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 NOTCH2Q04721 2471 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 DOCK8Q8NF50 2099 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 C1orf167Q5SNV9 1468 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 IGHV5-10-1A0A0J9YXX1 117 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 A0A1W2PQD3 144 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 C17orf51A8MQB3 221 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 NDUFC1O43677 76 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 NPYP01303 97 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 IGLV3-25P01717 112 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 ACYP1P07311 99 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 PIRTP0C851 137 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 IGHV1-8P0DP01 117 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 SNRPFP62306 86 aaKnown RBP3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 MIAQ16674 131 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 CFAP126Q5VTH2 177 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 C16orf47Q6ZP98 133 aaPredicted RBP3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 TMEM136Q6ZRR5 245 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 TMEM256Q8N2U0 113 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 CNEP1R1Q8N9A8 125 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 V9GYH0 126 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 ZNF646O15015 1829 aaPredicted RBP3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 RNF17Q9BXT8 1623 aaKnown RBP3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 EDC4Q6P2E9 1401 aaKnown RBP3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 DIP2AQ14689 1571 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 LAMC3Q9Y6N6 1575 aa3.25□□□□□ -1.89
CTNNB1-215ENST00000488914 MON2Q7Z3U7 1717 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 PPRC1Q5VV67 1664 aaKnown RBP3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 SCN1AP35498 2009 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 MAP2P11137 1827 aaKnown RBP3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 IGHV5-51A0A0C4DH38 117 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 PINLYPA6NC86 204 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 CXCL8P10145 99 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 SLC25A16P16260 332 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 CGB2Q6NT52 195 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 ODF3Q96PU9 254 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 RPP21Q9H633 154 aaKnown RBP3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 ZNF581Q9P0T4 197 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 A0A1B0GUL6 1792 aa3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 SUPT6HQ7KZ85 1726 aaKnown RBP3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 KIF26AQ9ULI4 1882 aaPredicted RBP3.24□□□□□ -1.89
CTNNB1-215ENST00000488914 SLC25A20O43772 301 aa3.23□□□□□ -1.89
CTNNB1-215ENST00000488914 BCE1O60756 84 aa3.23□□□□□ -1.89
CTNNB1-215ENST00000488914 APCSP02743 223 aa3.23□□□□□ -1.89
CTNNB1-215ENST00000488914 ASAH2BP0C7U1 165 aa3.23□□□□□ -1.89
CTNNB1-215ENST00000488914 RNASE2P10153 161 aaKnown RBP3.23□□□□□ -1.89
CTNNB1-215ENST00000488914 CRB1P82279 1406 aa3.23□□□□□ -1.89
CTNNB1-215ENST00000488914 RBM3P98179 157 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms