RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 Q8NAQ8 132 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 TXNDC17Q9BRA2 123 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 C11orf68Q9H3H3 251 aaKnown RBP11.37□□□□□ -0.59
C9orf3-219ENST00000488186 RBMY1A1P0DJD3 496 aaKnown RBP11.36□□□□□ -0.59
C9orf3-219ENST00000488186 RBMY1CP0DJD4 496 aa11.36□□□□□ -0.59
C9orf3-219ENST00000488186 RBMY1FQ15415 496 aaKnown RBP11.36□□□□□ -0.59
C9orf3-219ENST00000488186 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
C9orf3-219ENST00000488186 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
C9orf3-219ENST00000488186 PYGO2Q9BRQ0 406 aa11.36□□□□□ -0.59
C9orf3-219ENST00000488186 C3orf84H3BNL1 204 aa11.35□□□□□ -0.59
C9orf3-219ENST00000488186 RGS13O14921 159 aa11.35□□□□□ -0.59
C9orf3-219ENST00000488186 S100A9P06702 114 aaKnown RBP11.35□□□□□ -0.59
C9orf3-219ENST00000488186 TAGLN2P37802 199 aaKnown RBP11.35□□□□□ -0.59
C9orf3-219ENST00000488186 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
C9orf3-219ENST00000488186 CXorf65A6NEN9 183 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 CBY3A6NI87 242 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 ZNF324O75467 553 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-219ENST00000488186 PRM2P04554 102 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 SMUG1Q53HV7 270 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 PRR9Q5T870 116 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
C9orf3-219ENST00000488186 TRAV21A0A0B4J279 112 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 SCO2A0A1W2PP80 73 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 PDE6DO43924 150 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 IGLV2-11P01706 119 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 SPART-AS1P0CW21 52 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 BCL2P10415 239 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-219ENST00000488186 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 EIF4E3Q8N5X7 224 aaKnown RBP11.33□□□□□ -0.6
C9orf3-219ENST00000488186 MUC7Q8TAX7 377 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 NAGKQ9UJ70 344 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 ZFP30Q9Y2G7 519 aa11.33□□□□□ -0.6
C9orf3-219ENST00000488186 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
C9orf3-219ENST00000488186 GCGP01275 180 aa11.32□□□□□ -0.6
C9orf3-219ENST00000488186 AZU1P20160 251 aa11.32□□□□□ -0.6
C9orf3-219ENST00000488186 TMEM183BQ1AE95 376 aa11.32□□□□□ -0.6
C9orf3-219ENST00000488186 TVP23CQ96ET8 276 aa11.32□□□□□ -0.6
C9orf3-219ENST00000488186 C8orf49Q96NF6 230 aa11.32□□□□□ -0.6
C9orf3-219ENST00000488186 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 MUC21Q5SSG8 566 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 Q6AWC8 147 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 Q86TA4 180 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
C9orf3-219ENST00000488186 EIF5A2Q9GZV4 153 aaKnown RBP11.31□□□□□ -0.6
C9orf3-219ENST00000488186 MED9Q9NWA0 146 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
C9orf3-219ENST00000488186 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
C9orf3-219ENST00000488186 RAB14P61106 215 aa11.3□□□□□ -0.6
C9orf3-219ENST00000488186 LYPD6BQ8NI32 183 aa11.3□□□□□ -0.6
C9orf3-219ENST00000488186 C2CD4CQ8TF44 421 aa11.3□□□□□ -0.6
C9orf3-219ENST00000488186 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
C9orf3-219ENST00000488186 TIMM8BQ9Y5J9 83 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-219ENST00000488186 TRBV6-1A0A0K0K1D8 114 aa11.29□□□□□ -0.6
C9orf3-219ENST00000488186 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
C9orf3-219ENST00000488186 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
C9orf3-219ENST00000488186 ZFAND6Q6FIF0 208 aa11.29□□□□□ -0.6
C9orf3-219ENST00000488186 Q6ZQT7 251 aa11.29□□□□□ -0.6
C9orf3-219ENST00000488186 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
C9orf3-219ENST00000488186 PCNPQ8WW12 178 aaKnown RBP11.29□□□□□ -0.6
C9orf3-219ENST00000488186 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 FABP5P3A8MUU1 101 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 LTAP01374 205 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
C9orf3-219ENST00000488186 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
C9orf3-219ENST00000488186 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
C9orf3-219ENST00000488186 C11orf52Q96A22 123 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 KCNS1Q96KK3 526 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
C9orf3-219ENST00000488186 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
C9orf3-219ENST00000488186 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
C9orf3-219ENST00000488186 ZNF80P51504 273 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-219ENST00000488186 DAD1P61803 113 aa11.27□□□□□ -0.61
C9orf3-219ENST00000488186 TOR2AQ5JU69 321 aa11.27□□□□□ -0.61
C9orf3-219ENST00000488186 TMEM183AQ8IXX5 376 aa11.27□□□□□ -0.61
C9orf3-219ENST00000488186 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.61
C9orf3-219ENST00000488186 CSMD3Q7Z407 3707 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 CEBPGP53567 150 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 FAM162BQ5T6X4 162 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 GSN-AS1Q9NRJ2 163 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 TP53TG3Q9ULZ0 132 aa11.26□□□□□ -0.61
C9orf3-219ENST00000488186 ORM1P02763 201 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 GNG4P50150 75 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 IBA57Q5T440 356 aaKnown RBP11.25□□□□□ -0.61
C9orf3-219ENST00000488186 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms