RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
DDR1-244ENST00000482873 HLA-DMBP28068 263 aa11.85□□□□□ -0.51
DDR1-244ENST00000482873 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
DDR1-244ENST00000482873 GCSHP23434 173 aa11.84□□□□□ -0.51
DDR1-244ENST00000482873 PRTN3P24158 256 aa11.84□□□□□ -0.51
DDR1-244ENST00000482873 CD300EQ496F6 205 aaPredicted RBP11.84□□□□□ -0.51
DDR1-244ENST00000482873 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
DDR1-244ENST00000482873 ECSCRQ19T08 205 aa11.84□□□□□ -0.51
DDR1-244ENST00000482873 C11orf71Q6IPW1 123 aa11.84□□□□□ -0.51
DDR1-244ENST00000482873 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
DDR1-244ENST00000482873 TEX48A0A1B0GUV7 120 aa11.83□□□□□ -0.51
DDR1-244ENST00000482873 GAS8-AS1O95177 125 aa11.83□□□□□ -0.51
DDR1-244ENST00000482873 SMIM13P0DJ93 91 aa11.83□□□□□ -0.51
DDR1-244ENST00000482873 RPL24P83731 157 aaKnown RBP11.83□□□□□ -0.51
DDR1-244ENST00000482873 ODF1Q14990 250 aa11.83□□□□□ -0.51
DDR1-244ENST00000482873 TWIST1Q15672 202 aa11.83□□□□□ -0.51
DDR1-244ENST00000482873 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.51
DDR1-244ENST00000482873 IGKV2-40A0A087WW87 121 aaPredicted RBP11.83□□□□□ -0.52
DDR1-244ENST00000482873 IGHV3-49A0A0A0MS15 119 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 K7ERJ3 54 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 IGKV2D-40P01614 121 aaPredicted RBP11.83□□□□□ -0.52
DDR1-244ENST00000482873 EGR2P11161 476 aaPredicted RBP11.83□□□□□ -0.52
DDR1-244ENST00000482873 OR11H1Q8NG94 326 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 LINC01548A6NM66 108 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
DDR1-244ENST00000482873 Q8TAT8 98 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 MSRB1Q9NZV6 116 aa11.83□□□□□ -0.52
DDR1-244ENST00000482873 FLNCQ14315 2725 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 CFAP46Q8IYW2 2715 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 K7EMI3 77 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 ZNF562Q6V9R5 426 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
DDR1-244ENST00000482873 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■■□□ 16.6
DDR1-244ENST00000482873 NDUFA3O95167 84 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
DDR1-244ENST00000482873 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 CENPEQ02224 2701 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 ACACBO00763 2458 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 NPIPB5A8MRT5 1133 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 NPBQ8NG41 125 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 RNF5Q99942 180 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
DDR1-244ENST00000482873 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 FBLL1A6NHQ2 334 aaKnown RBP11.8□□□□□ -0.52
DDR1-244ENST00000482873 G3V318 75 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 C19orf84I3L1E1 186 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 MFAP4P55083 255 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 FAM110AQ9BQ89 295 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 CHAC1Q9BUX1 264 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 ZNF207O43670 478 aaKnown RBP11.8□□□□□ -0.52
DDR1-244ENST00000482873 LEPP41159 167 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 PIFOQ8TCI5 191 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 PHLDA1Q8WV24 401 aaPredicted RBP11.8□□□□□ -0.52
DDR1-244ENST00000482873 RNF185Q96GF1 192 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 PRR25Q96S07 402 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 BPESC1Q9GZL8 116 aa11.8□□□□□ -0.52
DDR1-244ENST00000482873 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 M0R1W7 72 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 PDE6HQ13956 83 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 TMEM219Q86XT9 240 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 VGLL1Q99990 258 aa11.79□□□□□ -0.52
DDR1-244ENST00000482873 PRSS1P07477 247 aa11.78□□□□□ -0.52
DDR1-244ENST00000482873 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
DDR1-244ENST00000482873 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
DDR1-244ENST00000482873 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
DDR1-244ENST00000482873 HIGD1BQ9P298 99 aa11.78□□□□□ -0.52
DDR1-244ENST00000482873 TSSC4Q9Y5U2 329 aaPredicted RBP11.78□□□□□ -0.52
DDR1-244ENST00000482873 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
DDR1-244ENST00000482873 AGRNO00468 2067 aa11.78□□□□□ -0.52
DDR1-244ENST00000482873 CTSGP08311 255 aa11.77□□□□□ -0.52
DDR1-244ENST00000482873 EVI2AP22794 236 aa11.77□□□□□ -0.52
DDR1-244ENST00000482873 GATA1P15976 413 aaPredicted RBP11.77□□□□□ -0.53
DDR1-244ENST00000482873 SAA4P35542 130 aa11.77□□□□□ -0.53
DDR1-244ENST00000482873 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
DDR1-244ENST00000482873 COX8CQ7Z4L0 72 aa11.77□□□□□ -0.53
DDR1-244ENST00000482873 RNF182Q8N6D2 247 aa11.77□□□□□ -0.53
DDR1-244ENST00000482873 IGKCP01834 107 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 FCER1GP30273 86 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 UCNP55089 124 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 HERV-K104P63124 156 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 ZC2HC1BQ5TFG8 222 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 FOXI2Q6ZQN5 318 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 Q8N9W7 124 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 CLEC3BP05452 202 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
DDR1-244ENST00000482873 TNFRSF6BO95407 300 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 ERCC8Q13216 396 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 FOXC2Q99958 501 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms