RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 FLI1Q01543 452 aaPredicted RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 MEF2BQ02080 365 aaPredicted RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 RBMY1FQ15415 496 aaKnown RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 TMEM183BQ1AE95 376 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 CASC10Q5T4H9 136 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 EIF4E3Q8N5X7 224 aaKnown RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 C11orf72Q8NBR9 251 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 C11orf45Q8TAV5 145 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 C2CD4CQ8TF44 421 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 SFT2D1Q8WV19 159 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 VGLL1Q99990 258 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 SPXQ9BT56 116 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 MLST8Q9BVC4 326 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 PLA2G2EQ9NZK7 142 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 DKK2Q9UBU2 259 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 TIMM8BQ9Y5J9 83 aaPredicted RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 SELENOKQ9Y6D0 94 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 NACAE9PAV3 2078 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 DYNC2H1Q8NCM8 4307 aaKnown RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 TRGV11A0A075B6L2 103 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 IGKV2-40A0A087WW87 121 aaPredicted RBP3.64□□□□□ -1.83
HDAC6-223ENST00000480525 TRAV10A0A0B4J240 114 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 LOC102723971A0A1B0GUV8 181 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 A0A1B0GVG6 124 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 IFNA7P01567 189 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 IGKV2D-40P01614 121 aaPredicted RBP3.64□□□□□ -1.83
HDAC6-223ENST00000480525 MED14OSP0DP75 135 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 BCL2P10415 239 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 TCL1AP56279 114 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 FAM3BP58499 235 aaPredicted RBP3.64□□□□□ -1.83
HDAC6-223ENST00000480525 SMUG1Q53HV7 270 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 IGFL4Q6B9Z1 124 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 CEMP1Q6PRD7 247 aaPredicted RBP3.64□□□□□ -1.83
HDAC6-223ENST00000480525 TEX261Q6UWH6 196 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 GOLT1AQ6ZVE7 132 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 Q86TA4 180 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 IQCF2Q8IXL9 164 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 TMEM183AQ8IXX5 376 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 FAM213BQ8TBF2 198 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 RASL10AQ92737 203 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 TMEM208Q9BTX3 173 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 TREM1Q9NP99 234 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 BIN3Q9NQY0 253 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 VAX2Q9UIW0 290 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 KLK5Q9Y337 293 aaPredicted RBP3.64□□□□□ -1.83
HDAC6-223ENST00000480525 BOLA1Q9Y3E2 137 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 YTHDF2Q9Y5A9 579 aaKnown RBP3.64□□□□□ -1.83
HDAC6-223ENST00000480525 LY96Q9Y6Y9 160 aa3.64□□□□□ -1.83
HDAC6-223ENST00000480525 STARD9Q9P2P6 4700 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 IGHV1OR15-1A0A075B7D0 117 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 CXorf65A6NEN9 183 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 CBY3A6NI87 242 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 FABP5P3A8MUU1 101 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 C9JCJ5 164 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 H3BTX0 84 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 SPINK4O60575 86 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 DEFB1P60022 68 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 UBE2G1P62253 170 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 CCL20P78556 96 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 SLAQ13239 276 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 ZNF674Q2M3X9 581 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 LINC01559Q495D7 138 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 FAM159AQ6UWV7 190 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 LINC01587Q99440 93 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 RETNQ9HD89 108 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 PSG8Q9UQ74 426 aa3.63□□□□□ -1.83
HDAC6-223ENST00000480525 LYSTQ99698 3801 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 hCG_2014768A0A024R1R8 64 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 TRAV12-2A0A075B6T6 113 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 SNURFLB1AK76 121 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 RGS13O14921 159 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 PAGE4O60829 102 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 IGKV3-20P01619 116 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 ATP5G1P05496 136 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 BTF3P20290 206 aaKnown RBP3.62□□□□□ -1.83
HDAC6-223ENST00000480525 ATP5G3P48201 142 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 FGF8P55075 233 aaPredicted RBP3.62□□□□□ -1.83
HDAC6-223ENST00000480525 CD300CQ08708 224 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 ZNF415Q09FC8 603 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 C12orf74Q32Q52 190 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 FAM74A3Q4VXF1 159 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 ZNF506Q5JVG8 444 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 FAM222AQ5U5X8 452 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 ZNF767PQ75MW2 155 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 PHLDA1Q8WV24 401 aaPredicted RBP3.62□□□□□ -1.83
HDAC6-223ENST00000480525 TVP23CQ96ET8 276 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 FAM210AQ96ND0 272 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 SDF2L1Q9HCN8 221 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 IL36BQ9NZH7 164 aa3.62□□□□□ -1.83
HDAC6-223ENST00000480525 TRAV8-1A0A0A6YYK1 113 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 IGHV3-16A0A0C4DH30 117 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 FAM231BA6NCW3 169 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 PGPEP1LA6NFU8 196 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 K7EP13 123 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 GCGP01275 180 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 RNASE4P34096 147 aaKnown RBP3.61□□□□□ -1.83
HDAC6-223ENST00000480525 AKR1C3P42330 323 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 RPL35P42766 123 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms