RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TOMM5Q8N4H5 51 aa13.35□□□□□ -0.27
PDLIM1-202ENST00000477757 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 TRBV7-9A0A0J9YWB2 115 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 C9orf170A2RU37 121 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 FABP12A6NFH5 140 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 IGHV3-30P01768 117 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 IGHV3-33P01772 117 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 IGHV3-30-3P0DP02 117 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 IGHV3-30-5P0DP03 117 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 TNFSF8P32971 234 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 ASAH1Q13510 395 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 OR10J3Q5JRS4 329 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 C12orf45Q8N5I9 185 aaPredicted RBP13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 DYNC2LI1Q8TCX1 351 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 AAMDCQ9H7C9 122 aa13.34□□□□□ -0.27
PDLIM1-202ENST00000477757 LECT2O14960 151 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 RS1O15537 224 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 PYYP10082 97 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 LINC01620Q4KN68 170 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 OR4C5Q8NGB2 326 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 Q8TAT8 98 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 DEDD2Q8WXF8 326 aa13.33□□□□□ -0.28
PDLIM1-202ENST00000477757 C7orf66A4D0T2 115 aa13.32□□□□□ -0.28
PDLIM1-202ENST00000477757 ZNF138P52744 262 aa13.32□□□□□ -0.28
PDLIM1-202ENST00000477757 TMEM183BQ1AE95 376 aa13.32□□□□□ -0.28
PDLIM1-202ENST00000477757 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
PDLIM1-202ENST00000477757 TMEM183AQ8IXX5 376 aa13.32□□□□□ -0.28
PDLIM1-202ENST00000477757 SLC39A9Q9NUM3 307 aa13.32□□□□□ -0.28
PDLIM1-202ENST00000477757 TRGV11A0A075B6L2 103 aa13.31□□□□□ -0.28
PDLIM1-202ENST00000477757 GATA1P15976 413 aaPredicted RBP13.31□□□□□ -0.28
PDLIM1-202ENST00000477757 ZNF266Q14584 549 aa13.31□□□□□ -0.28
PDLIM1-202ENST00000477757 IAH1Q2TAA2 248 aaPredicted RBP13.31□□□□□ -0.28
PDLIM1-202ENST00000477757 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
PDLIM1-202ENST00000477757 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
PDLIM1-202ENST00000477757 IGLV2-8P01709 118 aa13.3□□□□□ -0.28
PDLIM1-202ENST00000477757 PFN1P07737 140 aaKnown RBP13.3□□□□□ -0.28
PDLIM1-202ENST00000477757 RPL29P47914 159 aaKnown RBP13.3□□□□□ -0.28
PDLIM1-202ENST00000477757 LELP1Q5T871 98 aa13.3□□□□□ -0.28
PDLIM1-202ENST00000477757 BAK1Q16611 211 aa13.29□□□□□ -0.28
PDLIM1-202ENST00000477757 MBPP02686 304 aaPredicted RBP13.28□□□□□ -0.28
PDLIM1-202ENST00000477757 ACOT6Q3I5F7 207 aaPredicted RBP13.28□□□□□ -0.28
PDLIM1-202ENST00000477757 Q6AWC8 147 aa13.28□□□□□ -0.28
PDLIM1-202ENST00000477757 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
PDLIM1-202ENST00000477757 UQCC1Q9NVA1 299 aa13.28□□□□□ -0.28
PDLIM1-202ENST00000477757 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 IGHV3-16A0A0C4DH30 117 aa13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 M0R2P5 195 aa13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 VWC2Q2TAL6 325 aa13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 PYDC2Q56P42 97 aa13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 FAM159AQ6UWV7 190 aa13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 GPN1Q9HCN4 374 aaPredicted RBP13.27□□□□□ -0.29
PDLIM1-202ENST00000477757 Q8N3U1 123 aa13.26□□□□□ -0.29
PDLIM1-202ENST00000477757 SLC25A29Q8N8R3 303 aa13.26□□□□□ -0.29
PDLIM1-202ENST00000477757 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
PDLIM1-202ENST00000477757 GSKIPQ9P0R6 139 aa13.26□□□□□ -0.29
PDLIM1-202ENST00000477757 UBE2L5PA0A1B0GUS4 154 aa13.25□□□□□ -0.29
PDLIM1-202ENST00000477757 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
PDLIM1-202ENST00000477757 CHAC2Q8WUX2 184 aa13.25□□□□□ -0.29
PDLIM1-202ENST00000477757 SLC25A2Q9BXI2 301 aa13.25□□□□□ -0.29
PDLIM1-202ENST00000477757 V9GYH0 126 aa13.25□□□□□ -0.29
PDLIM1-202ENST00000477757 RBAKDNA6NC62 111 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 FBLL1A6NHQ2 334 aaKnown RBP13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 L7N2F9 121 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 CST7O76096 145 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 NDUFB6O95139 128 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 MT1HL1P0DM35 61 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 HNRNPA3P51991 378 aaKnown RBP13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 VAMP2P63027 116 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 BAXQ07812 192 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 RHOHQ15669 191 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 BAALCQ8WXS3 180 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
PDLIM1-202ENST00000477757 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 CAV2P51636 162 aa13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 RPL37AP61513 92 aaKnown RBP13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 FAM167A-AS1Q96KT0 104 aa13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 PRADC1Q9BSG0 188 aa13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 NAGKQ9UJ70 344 aa13.23□□□□□ -0.29
PDLIM1-202ENST00000477757 TRBV6-4A0A1B0GX49 114 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 BCAP31P51572 246 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 GCSAMLQ5JQS6 135 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 TOR2AQ5JU69 321 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 Q8N976 141 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 LENEPQ9Y5L5 61 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 COX11Q9Y6N1 276 aa13.22□□□□□ -0.29
PDLIM1-202ENST00000477757 TNXBP22105 4242 aa13.21□□□□□ -0.29
PDLIM1-202ENST00000477757 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
PDLIM1-202ENST00000477757 PHYHIPLQ96FC7 376 aa13.21□□□□□ -0.29
PDLIM1-202ENST00000477757 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
PDLIM1-202ENST00000477757 MRPS26Q9BYN8 205 aaKnown RBP13.2□□□□□ -0.3
PDLIM1-202ENST00000477757 C11orf1Q9H5F2 150 aa13.2□□□□□ -0.3
PDLIM1-202ENST00000477757 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
PDLIM1-202ENST00000477757 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 GNRH2O43555 120 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 FGF7P21781 194 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms