RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 HIST1H2BJP06899 126 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 AKAIN1P0CW23 69 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 INAFM2P0DMQ5 153 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 LINC00694P0DN24 101 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 SLC25A16P16260 332 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 CRHBPP24387 322 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 CRYBB3P26998 211 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 MPV17P39210 176 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 DYNLT3P51808 116 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 RBM11P57052 281 aaKnown RBP1.97□□□□□ -2.09
HMGN4-202ENST00000477243 TSPEAR-AS2P59090 65 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 HBBP68871 147 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 BTG2P78543 158 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 QRFPP83859 136 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 RHOGP84095 191 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 CDK6Q00534 326 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 PLGLB1Q02325 96 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 RELAQ04206 551 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 HSD17B12Q53GQ0 312 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 LDLRAD2Q5SZI1 272 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 C9orf129Q5T035 196 aaKnown RBP1.97□□□□□ -2.09
HMGN4-202ENST00000477243 ZC2HC1BQ5TFG8 222 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 TMEM244Q5VVB8 128 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 MIR17HGQ75NE6 70 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 PHF5AQ7RTV0 110 aaKnown RBP1.97□□□□□ -2.09
HMGN4-202ENST00000477243 ATOH7Q8N100 152 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 OR5D16Q8NGK9 328 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 OR8D4Q8NGM9 314 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 DCANP1Q8TF63 244 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 NAT14Q8WUY8 206 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 COPS9Q8WXC6 57 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 SCGB3A1Q96QR1 104 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 SMR3AQ99954 134 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 TSSK6Q9BXA6 273 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 BANF2Q9H503 90 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 C11orf1Q9H5F2 150 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 FAIMQ9NVQ4 179 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 BOKQ9UMX3 212 aaPredicted RBP1.97□□□□□ -2.09
HMGN4-202ENST00000477243 LINC00588Q9Y4M8 146 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 ABCA1O95477 2261 aa1.97□□□□□ -2.09
HMGN4-202ENST00000477243 KMT2DO14686 5537 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 LAMA4Q16363 1823 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 TP53BP1Q12888 1972 aaPredicted RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 TRAV30A0A087WSZ9 112 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 TRAV27A0A087WT01 109 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 A0A0D9SEW6 157 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 LCE6AA0A183 80 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 ODAMA1E959 279 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 H3BMG7 143 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 CDC42EP2O14613 210 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 SLC25A20O43772 301 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 SH2D1AO60880 128 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 PGLYRP1O75594 196 aaPredicted RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF432O94892 652 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 IGHV3-7P01780 117 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF883P0CG24 379 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 CFC1BP0CG36 223 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 CFC1P0CG37 223 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 CD28P10747 220 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 KRTAP10-9P60411 292 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 IGLV3-21P80748 117 aaPredicted RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 SYCNQ0VAF6 134 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 HES1Q14469 280 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF141Q15928 474 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 TMEM155Q4W5P6 130 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 C10orf91Q5T1B1 145 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 LCN15Q6UWW0 184 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 LYZL2Q7Z4W2 148 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 SPATA12Q7Z6I5 190 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 GTSCR1Q86UQ5 136 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 LYG1Q8N1E2 194 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 RPRMLQ8N4K4 120 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 VGLL1Q99990 258 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 UPK3BQ9BT76 320 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 MRPL32Q9BYC8 188 aaKnown RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 LHX9Q9NQ69 397 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 OSTCQ9NRP0 149 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF355PQ9NSJ1 428 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 SCN3BQ9NY72 215 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF222Q9UK12 451 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 EPDR1Q9UM22 224 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 CELA1Q9UNI1 258 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 RNF11Q9Y3C5 154 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 DIDO1Q9BTC0 2240 aaKnown RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 NYNRINQ9P2P1 1898 aaKnown RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 KIF26AQ9ULI4 1882 aaPredicted RBP1.96□□□□□ -2.1
HMGN4-202ENST00000477243 AKAP6Q13023 2319 aa1.96□□□□□ -2.1
HMGN4-202ENST00000477243 AGRNO00468 2067 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 NUP214P35658 2090 aaPredicted RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 MYH1P12882 1939 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 CROCCQ5TZA2 2017 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 IGKV2D-30A0A075B6S6 120 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 IGKV1-9A0A0C4DH69 117 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 TRBV27A0A0K0K1C4 114 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 PINLYPA6NC86 204 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 C17orf51A8MQB3 221 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms