RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RPL29P47914 159 aaKnown RBP8.44□□□□□ -1.06
SKA3-206ENST00000475251 PPT1P50897 306 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 TIRAPP58753 221 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 LINC01556Q5JQF7 62 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 RASL10AQ92737 203 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 ZNF479Q96JC4 524 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 SLC25A31Q9H0C2 315 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 SLC39A9Q9NUM3 307 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 WDR83OSQ9Y284 106 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 TRGV11A0A075B6L2 103 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 NDUFB6O95139 128 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 S100A5P33763 92 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 INPP1P49441 399 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 BCAP31P51572 246 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 CAV2P51636 162 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 ZNF846Q147U1 533 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 PRR9Q5T870 116 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 BLNKQ8WV28 456 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 GPN1Q9HCN4 374 aaPredicted RBP8.43□□□□□ -1.06
SKA3-206ENST00000475251 V9GYH0 126 aa8.43□□□□□ -1.06
SKA3-206ENST00000475251 IGKV2-40A0A087WW87 121 aaPredicted RBP8.42□□□□□ -1.06
SKA3-206ENST00000475251 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 IGKV2D-40P01614 121 aaPredicted RBP8.42□□□□□ -1.06
SKA3-206ENST00000475251 MBPP02686 304 aaPredicted RBP8.42□□□□□ -1.06
SKA3-206ENST00000475251 ZNF138P52744 262 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 BAXQ07812 192 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 TDRG1Q3Y452 100 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 FAM122CQ6P4D5 195 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
SKA3-206ENST00000475251 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 CST7O76096 145 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 PYYP10082 97 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 PVALBP20472 110 aaPredicted RBP8.41□□□□□ -1.06
SKA3-206ENST00000475251 S100A11P31949 105 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 VWC2Q2TAL6 325 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 FAM159AQ6UWV7 190 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 Q6ZSA8 131 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 OR4C5Q8NGB2 326 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 Q9HAA7 133 aa8.41□□□□□ -1.06
SKA3-206ENST00000475251 H3BMQ9 156 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 PFN1P07737 140 aaKnown RBP8.4□□□□□ -1.06
SKA3-206ENST00000475251 CSN1S1P47710 185 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 HBG1P69891 147 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 HBG2P69892 147 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 ZNF266Q14584 549 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 LAGE3Q14657 143 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 CNPY1Q3B7I2 92 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 OR10J3Q5JRS4 329 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 STX12Q86Y82 276 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 MITD1Q8WV92 249 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 FLVCR2Q9UPI3 526 aa8.4□□□□□ -1.06
SKA3-206ENST00000475251 LSM5Q9Y4Y9 91 aaKnown RBP8.4□□□□□ -1.06
SKA3-206ENST00000475251 RBAKDNA6NC62 111 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 CENPXA8MT69 81 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 OXTP01178 125 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 SULT1A1P50225 295 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 TMEM183BQ1AE95 376 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 TRIQKQ629K1 86 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 Q6AWC8 147 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 Q6ZQT7 251 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 TMEM183AQ8IXX5 376 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 Q8TAT8 98 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 LENEPQ9Y5L5 61 aa8.39□□□□□ -1.07
SKA3-206ENST00000475251 M0R2P5 195 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 NBEAP1P0C6P0 100 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 FGF7P21781 194 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 ASAH1Q13510 395 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 BAK1Q16611 211 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 SPANXN2Q5MJ10 180 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 SLC25A2Q9BXI2 301 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 SH3BGRL3Q9H299 93 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
SKA3-206ENST00000475251 FAM24AA6NFZ4 105 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 CIDEAO60543 219 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 XP32Q5T750 250 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 ATP5SQ99766 215 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 PRADC1Q9BSG0 188 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 NPCDR1Q9BY65 106 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 OR51M1Q9H341 326 aa8.37□□□□□ -1.07
SKA3-206ENST00000475251 LYRM2Q9NU23 88 aaPredicted RBP8.37□□□□□ -1.07
SKA3-206ENST00000475251 HMCN2Q8NDA2 5059 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 LOC100131303A0A0U1RQF7 123 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 FAM25EA8MYX2 175 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 GATA1P15976 413 aaPredicted RBP8.36□□□□□ -1.07
SKA3-206ENST00000475251 TOR2AQ5JU69 321 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 LELP1Q5T871 98 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 PAXXQ9BUH6 204 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 KCNIP2Q9NS61 270 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms