RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 LINC01565O15544 149 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 ZNF883P0CG24 379 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 RPS16P62249 146 aaKnown RBP3.1□□□□□ -1.91
USP16-205ENST00000474835 SAP25Q8TEE9 199 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 CLPSL1A2RUU4 121 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 C11orf86A6NJI1 115 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 F8VRH5 84 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 CXCL13O43927 109 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 DPM2O94777 84 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 APOMO95445 188 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 P01737 135 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 TFF1P04155 84 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 SSR4P51571 173 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 RIGQ13278 110 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 Q6ZQT7 251 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 C15orf53Q8NAA6 179 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 FAM186AA6NE01 2351 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 CR1P17927 2039 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 A0A1W2PNU3 283 aaPredicted RBP3.09□□□□□ -1.91
USP16-205ENST00000474835 TIMM23O14925 209 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 DUX1O43812 170 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 RBMXL2O75526 392 aaKnown RBP3.09□□□□□ -1.91
USP16-205ENST00000474835 ZNF22P17026 224 aaPredicted RBP3.09□□□□□ -1.91
USP16-205ENST00000474835 RPL24P83731 157 aaKnown RBP3.09□□□□□ -1.91
USP16-205ENST00000474835 C10orf126Q8N4M7 172 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 NPBQ8NG41 125 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 C8orf49Q96NF6 230 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 KAAG1Q9UBP8 84 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 SIT1Q9Y3P8 196 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 BUB3O43684 328 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 SH2D1AO60880 128 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 ATP5G1P05496 136 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 CCL5P13501 91 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 PRDX2P32119 198 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 SPRR3Q9UBC9 169 aa3.09□□□□□ -1.91
USP16-205ENST00000474835 IGHV3OR16-10A0A075B7F0 116 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 TRAV8-2A0A0B4J237 113 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 GAGE12JA6NER3 117 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 GAGE7O76087 117 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 TNFRSF6BO95407 300 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 GAGE12FP0CL80 117 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 GAGE12GP0CL81 117 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 GAGE12IP0CL82 117 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 GAGE4Q13068 117 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 ZNF876PQ49A33 203 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 Q6ZS46 218 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 CFHR4Q92496 578 aa3.09□□□□□ -1.92
USP16-205ENST00000474835 MRPL35Q9NZE8 188 aaKnown RBP3.09□□□□□ -1.92
USP16-205ENST00000474835 IGLV5-45A0A087WSX0 123 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 IGHV1-69DA0A0B4J2H0 117 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 TRBV6-5A0A0K0K1A5 114 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 SDHAF1A6NFY7 115 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 PPIFP30405 207 aaKnown RBP3.08□□□□□ -1.92
USP16-205ENST00000474835 POLR2KP53803 58 aaKnown RBP3.08□□□□□ -1.92
USP16-205ENST00000474835 ZFAND6Q6FIF0 208 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 GTSCR1Q86UQ5 136 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 Q8N1Y9 231 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 RAXQ9Y2V3 346 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 SEM1Q6ZVN7 128 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 ZNF808Q8N4W9 903 aaPredicted RBP3.08□□□□□ -1.92
USP16-205ENST00000474835 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 CEP290O15078 2479 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 PIEZO2Q9H5I5 2752 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 URB1O60287 2271 aaKnown RBP3.08□□□□□ -1.92
USP16-205ENST00000474835 IGLV11-55A0A075B6I3 123 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 IGHV1-18A0A0C4DH31 117 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 H7C423 109 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 C5orf47Q569G3 176 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 Q6ZT83 130 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 S1PR3Q99500 378 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 RNF5Q99942 180 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 RASL11BQ9BPW5 248 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 OBP2BQ9NPH6 170 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 UFC1Q9Y3C8 167 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 SLC25A15Q9Y619 301 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 NAV3Q8IVL0 2385 aa3.08□□□□□ -1.92
USP16-205ENST00000474835 TRAV8-1A0A0A6YYK1 113 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 TRBV10-2A0A0K0K1G8 114 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 PRB4P10163 310 aaPredicted RBP3.07□□□□□ -1.92
USP16-205ENST00000474835 C9orf47Q6ZRZ4 202 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 LY6G5BQ8NDX9 201 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 TMEM101Q96IK0 257 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 A8MTW9 85 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 H7C1H1 209 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 SCRG1O75711 98 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 CAMPP49913 170 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 ADIPOQQ15848 244 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 ZC2HC1BQ5TFG8 222 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 TDHQ8IZJ6 230 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 FAM216BQ8N7L0 139 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 FANCD2OSQ96PS1 177 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 PLEKHA3Q9HB20 300 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 NGBQ9NPG2 151 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 NHP2Q9NX24 153 aaKnown RBP3.07□□□□□ -1.92
USP16-205ENST00000474835 C21orf62Q9NYP8 219 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 B4GALT7Q9UBV7 327 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms