RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MPV17LQ2QL34 196 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 NMSQ5H8A3 153 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 SH2D6Q7Z4S9 175 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 PRNTQ86SH4 94 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNRF1Q8ND25 227 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 TVP23CQ96ET8 276 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 IGHV6-1A0A0B4J1U7 121 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 A0A0D9SFI3 127 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 TMEM256-PLSCR3K7ERE1 68 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 HLA-DQA1P01909 254 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 RPS21P63220 83 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 ZC2HC1BQ5TFG8 222 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 GGNQ86UU5 652 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 H1FXQ92522 213 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 C17orf77Q96MU5 243 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 HDHD3Q9BSH5 251 aaPredicted RBP4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 CHCHD5Q9BSY4 110 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 RNF126Q9BV68 326 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 DPH3P1Q9H4G8 78 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 PRO0461Q9UI25 63 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 PHF3Q92576 2039 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 IGHV1-69DA0A0B4J2H0 117 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 TCL1BO95988 128 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 FCGR2CP31995 323 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF80P51504 273 aaPredicted RBP4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 CRYBA2P53672 197 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 ERVK-16P61578 105 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 ADIGQ0VDE8 80 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 DEFB109BQ30KR1 87 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 AMN1Q8IY45 258 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 MORN4Q8NDC4 146 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 STAG3L4Q8TBR4 150 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 TAF15Q92804 592 aaKnown RBP eCLIP4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 ABHD14BQ96IU4 210 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
SMARCE1-208ENST00000474246 MAP1AP78559 2803 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 TRBV5-4A0A0C4DH59 114 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 SDCBPO00560 298 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 COX7A2P2O60397 106 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 ORMDL2Q53FV1 153 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 ODF3L1Q8IXM7 274 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 FAM57AQ8TBR7 257 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 C10orf105Q8TEF2 133 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 CHAC1Q9BUX1 264 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 HHLA3Q9XRX5 114 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 MOB4Q9Y3A3 225 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 KIAA1109Q2LD37 5005 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF469Q96JG9 3925 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 IGKV1D-43A0A0B4J1Z2 117 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 K7EM74 188 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 IGKCP01834 107 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 HSPB1P04792 205 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 COL8A2P25067 703 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 CSN1S1P47710 185 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 SPATA12Q7Z6I5 190 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 SBSPONQ8IVN8 264 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF491Q8N8L2 437 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 GTSF1Q8WW33 167 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 FAM218AQ96MZ4 157 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF747Q9BV97 191 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 KIAA1549LQ6ZVL6 1849 aa4.58□□□□□ -1.68
SMARCE1-208ENST00000474246 ATOX1O00244 68 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 OR1I1O60431 355 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 RPL23P62829 140 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 HOXA4Q00056 320 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 TMEM155Q4W5P6 130 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF101Q8IZC7 436 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 SDF2L1Q9HCN8 221 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 IGHV3OR16-13A0A075B7E8 117 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 A0A0D9SEW6 157 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 INS-IGF2F8WCM5 200 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 NXPH4O95158 308 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 CD7P09564 240 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 FUT5Q11128 374 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 EBLN2Q6P2I7 272 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 GEMIN6Q8WXD5 167 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 SLC25A22Q9H936 323 aa4.57□□□□□ -1.68
SMARCE1-208ENST00000474246 IGLV3-27P01718 113 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 IGHV3-7P01780 117 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 INAFM2P0DMQ5 153 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 EGR2P11161 476 aaPredicted RBP4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 DAPP51397 102 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 UBE2BP63146 152 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 GFRALQ6UXV0 394 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 POM121L12Q8N7R1 296 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 NKAPP1Q8N9T2 125 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 MGST2Q99735 147 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 C11orf21Q9P2W6 132 aa4.56□□□□□ -1.68
SMARCE1-208ENST00000474246 TRAV1-1A0A0B4J248 108 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 SOD1P00441 154 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 SMIM13P0DJ93 91 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 TMEM136Q6ZRR5 245 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 Q6ZSV7 163 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 TACC2O95359 2948 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms