RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 TMEM256Q8N2U0 113 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 CEP192Q8TEP8 1941 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 F6UB75 175 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 WIPF2Q8TF74 440 aaPredicted RBP9.6□□□□□ -0.87
IRF1-208ENST00000472045 PTPRSQ13332 1948 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 GFRA4Q9GZZ7 299 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 MUC22E2RYF6 1773 aaPredicted RBP9.6□□□□□ -0.87
IRF1-208ENST00000472045 IGKCP01834 107 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 OR2K2Q8NGT1 345 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 SPTBN4Q9H254 2564 aa9.6□□□□□ -0.87
IRF1-208ENST00000472045 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 S100A7L2Q5SY68 101 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 ZNRF2Q8NHG8 242 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 SMKR1H3BMG3 65 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 MRPL16Q9NX20 251 aaKnown RBP9.59□□□□□ -0.87
IRF1-208ENST00000472045 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 LY6G6DO95868 133 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 GHRHP01286 108 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 PLNP26678 52 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 VWC2Q2TAL6 325 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 NOP10Q9NPE3 64 aaKnown RBP9.59□□□□□ -0.87
IRF1-208ENST00000472045 SHANK1Q9Y566 2161 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 TEX48A0A1B0GUV7 120 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 ATRAIDQ6UW56 229 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
IRF1-208ENST00000472045 I3L2K1 104 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 K7EIM0 57 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 PCNTO95613 3336 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 A0A096LPF7 62 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 NAV2Q8IVL1 2488 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 PLCE1Q9P212 2302 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
IRF1-208ENST00000472045 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 FXYD5Q96DB9 178 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 C14orf144Q96I85 54 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 ZNF106Q9H2Y7 1883 aaKnown RBP9.57□□□□□ -0.88
IRF1-208ENST00000472045 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 INSL3P51460 131 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 TRBV24-1A0A075B6N3 115 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 TRAV2A0A0B4J234 112 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 Q6YL49 198 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 TMEM243Q9BU79 118 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 A0A0J9YY99 117 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 PRSS46E5RG02 174 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 CTSGP08311 255 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 C11orf71Q6IPW1 123 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 MRPL53Q96EL3 112 aaKnown RBP9.57□□□□□ -0.88
IRF1-208ENST00000472045 JPT2Q9H910 190 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 GSN-AS1Q9NRJ2 163 aa9.57□□□□□ -0.88
IRF1-208ENST00000472045 M0R2P5 195 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 CGB3P0DN86 165 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 HLA-DMBP28068 263 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 SPART-AS1P0CW21 52 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 PRR20EP86478 221 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 PRR20CP86479 221 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 PRR20DP86480 221 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 PRR20BP86481 221 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 PRR20AP86496 221 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 NDUFA11Q86Y39 141 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 PLEKHB2Q96CS7 222 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 SONP18583 2426 aaKnown RBP9.56□□□□□ -0.88
IRF1-208ENST00000472045 I3L3M4 83 aa9.56□□□□□ -0.88
IRF1-208ENST00000472045 TNFRSF6BO95407 300 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 IGLV2-23P01705 113 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 GAGE6Q13070 117 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 RHOHQ15669 191 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 LY6G5BQ8NDX9 201 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 FREM1Q5H8C1 2179 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 C17orf77Q96MU5 243 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 NCKAP5O14513 1909 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 CCDC168Q8NDH2 2452 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 FAM231BA6NCW3 169 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 CT83Q5H943 113 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 U3KQE9 123 aa9.55□□□□□ -0.88
IRF1-208ENST00000472045 ODF3BA8MYP8 253 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 K7EMT4 169 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 SHISA2Q6UWI4 295 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 AGPAT4-IT1Q9H0P7 198 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 FSTL3O95633 263 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 IGKV1-17P01599 117 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 CRYGCP07315 174 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 ODF3L1Q8IXM7 274 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 MEGF9Q9H1U4 602 aa9.54□□□□□ -0.88
IRF1-208ENST00000472045 TEX22C9J3V5 150 aa9.53□□□□□ -0.88
IRF1-208ENST00000472045 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
IRF1-208ENST00000472045 DNAH12Q6ZR08 3092 aa9.53□□□□□ -0.88
IRF1-208ENST00000472045 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms