RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GALR1P47211 349 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 FXYD4P59646 89 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 RAP2BP61225 183 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 TSPAN5P62079 268 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 AADACL3Q5VUY0 350 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 OR8G2PQ6IF36 304 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 PRSS54Q6PEW0 395 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 ATRAIDQ6UW56 229 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 SVBPQ8N300 66 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 C12orf45Q8N5I9 185 aaPredicted RBP3.87□□□□□ -1.79
HDAC3-206ENST00000471968 FER1L6-AS1Q8NA97 138 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 ZBTB34Q8NCN2 500 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 BEST4Q8NFU0 473 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 OR2T35Q8NGX2 323 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 SFT2D1Q8WV19 159 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 NKX6-2Q9C056 277 aaPredicted RBP3.87□□□□□ -1.79
HDAC3-206ENST00000471968 GTSF1LQ9H1H1 148 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 SLC25A32Q9H2D1 315 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 OR51M1Q9H341 326 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 NUDT15Q9NV35 164 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 IGHV1OR15-1A0A075B7D0 117 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 NAP1L6A6NFF2 107 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 G3V3Q6 166 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 SSNA1O43805 119 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 HPGDSO60760 199 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 APOC3P02656 99 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 TCRBP04435 133 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 OR10J4P0C629 311 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 PVALBP20472 110 aaPredicted RBP3.86□□□□□ -1.79
HDAC3-206ENST00000471968 S100A11P31949 105 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 PRSS3P35030 304 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 SUB1P53999 127 aaKnown RBP eCLIP3.86□□□□□ -1.79
HDAC3-206ENST00000471968 TAS2R46P59540 309 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 RAB4BP61018 213 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 ARL6IP6Q8N6S5 226 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 OR4A16Q8NH70 328 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 OR1S1Q8NH92 325 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 C15orf40Q8WUR7 153 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 DIRC1Q969H9 104 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 MLST8Q9BVC4 326 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 SLC5A7Q9GZV3 580 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 SLC25A22Q9H936 323 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 EHFQ9NZC4 300 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 Q9UF83 564 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 ANXA10Q9UJ72 324 aa3.86□□□□□ -1.79
HDAC3-206ENST00000471968 RAB19A4D1S5 217 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 MEIS3P1A6NDR6 274 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 FAM74A7A6NL05 159 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 SNRPGP15A8MWD9 76 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 CTDSPLO15194 276 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 SEC11BP0C7V7 166 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 PGAM2P15259 253 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 CXCL3P19876 107 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 FCGR2CP31995 323 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 LPAR6P43657 344 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 TAS2R20P59543 309 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 AP3S2P59780 193 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
HDAC3-206ENST00000471968 RAB5BP61020 215 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 HSPE1P61604 102 aaKnown RBP3.85□□□□□ -1.79
HDAC3-206ENST00000471968 LYZP61626 148 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 COX6A2Q02221 97 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 FAM74A3Q4VXF1 159 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 LPCAT3Q6P1A2 487 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 Q6ZS49 121 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 NIT1Q86X76 327 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 HOGA1Q86XE5 327 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 TOMM5Q8N4H5 51 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 ARRDC1Q8N5I2 433 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 SLC35G3Q8N808 338 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 OR10P1Q8NGE3 313 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 OR5AP2Q8NGF4 316 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 OR10G4Q8NGN3 311 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 RNASE11Q8TAA1 199 aaKnown RBP3.85□□□□□ -1.79
HDAC3-206ENST00000471968 GLYATL2Q8WU03 294 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 FCAMRQ8WWV6 532 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 RRNAD1Q96FB5 475 aaKnown RBP3.85□□□□□ -1.79
HDAC3-206ENST00000471968 PHYHIPLQ96FC7 376 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 C20orf85Q9H1P6 137 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 AUNIPQ9H7T9 357 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 LINC00846Q9NV44 126 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 EXTL2Q9UBQ6 330 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 TP53TG3Q9ULZ0 132 aa3.85□□□□□ -1.79
HDAC3-206ENST00000471968 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 IGHV3-16A0A0C4DH30 117 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 EIF3GO75821 320 aaKnown RBP eCLIP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 NXPH3O95157 252 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 PPYP01298 95 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 IL5P05113 134 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 CXCL2P19875 107 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 ZNF138P52744 262 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 ANXA2RQ3ZCQ2 193 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 RNASE10Q5GAN6 216 aaKnown RBP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 NPIPB3Q92617 1050 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 ACY3Q96HD9 319 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 SEC22AQ96IW7 307 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 ZNF2Q9BSG1 426 aaPredicted RBP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 TMEM222Q9H0R3 208 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms