RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PIGBOS1A0A0B4J2F0 54 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 C5orf51A6NDU8 294 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 GGTLC3B5MD39 225 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 PFN1P07737 140 aaKnown RBP4.5□□□□□ -1.69
HDAC1-204ENST00000471488 GUK1Q16774 197 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 TDRG1Q3Y452 100 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 FAM159AQ6UWV7 190 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 Q6ZRG5 221 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 DAZ4Q86SG3 579 aaKnown RBP4.5□□□□□ -1.69
HDAC1-204ENST00000471488 Q8N976 141 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 SAT2Q96F10 170 aaPredicted RBP4.5□□□□□ -1.69
HDAC1-204ENST00000471488 DPH3Q96FX2 82 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 PRADC1Q9BSG0 188 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 FUNDC2Q9BWH2 189 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 AAMDCQ9H7C9 122 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 GPN1Q9HCN4 374 aaPredicted RBP4.5□□□□□ -1.69
HDAC1-204ENST00000471488 DAZ3Q9NR90 486 aaKnown RBP4.5□□□□□ -1.69
HDAC1-204ENST00000471488 URGCP-MRPS24S4R325 110 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 LRP2P98164 4655 aa4.5□□□□□ -1.69
HDAC1-204ENST00000471488 TRGV11A0A075B6L2 103 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 DUXBA0A1W2PPF3 345 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 FBLL1A6NHQ2 334 aaKnown RBP4.49□□□□□ -1.69
HDAC1-204ENST00000471488 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 PYYP10082 97 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 SSBP1Q04837 148 aaKnown RBP4.49□□□□□ -1.69
HDAC1-204ENST00000471488 ASAH1Q13510 395 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 LAGE3Q14657 143 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 BAK1Q16611 211 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 TOR2AQ5JU69 321 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 LELP1Q5T871 98 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 PXDC1Q5TGL8 231 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 MCFD2Q8NI22 146 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 SMIM4Q8WVI0 70 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 RMI2Q96E14 147 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
HDAC1-204ENST00000471488 TRBV19A0A075B6N1 114 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 PRSS47A8MTI9 375 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 CAMLGP49069 296 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 ZNF138P52744 262 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 UBE2MP61081 183 aaKnown RBP4.48□□□□□ -1.69
HDAC1-204ENST00000471488 MRPS10P82664 201 aaKnown RBP4.48□□□□□ -1.69
HDAC1-204ENST00000471488 RAB31Q13636 194 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 FFAR4Q5NUL3 377 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 MIC13Q5XKP0 118 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 SLC25A29Q8N8R3 303 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 OR1L4Q8NGR5 311 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 RASL10AQ92737 203 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 DIRAS2Q96HU8 199 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 DNAJC30Q96LL9 226 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 MGST2Q99735 147 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 SPXQ9BT56 116 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 GTSF1LQ9H1H1 148 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 GSKIPQ9P0R6 139 aa4.48□□□□□ -1.69
HDAC1-204ENST00000471488 A0A087WXM4 84 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 TRAV8-1A0A0A6YYK1 113 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 ANKRD20A5PA0PJZ0 165 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GAGE12JA6NER3 117 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 M0R2P5 195 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 CTDSP2O14595 271 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GNRH2O43555 120 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 TSC22D2O75157 780 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 OR10J4P0C629 311 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 SLC25A6P12236 298 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GATA1P15976 413 aaPredicted RBP4.47□□□□□ -1.69
HDAC1-204ENST00000471488 CRISP2P16562 243 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 BCAP31P51572 246 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GAGE1Q13065 139 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GAGE4Q13068 117 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GAGE5Q13069 117 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 PPP1R1AQ13522 171 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 RHOHQ15669 191 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 GAGE13Q4V321 117 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 TMEM128Q5BJH2 165 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 KCNIP4Q6PIL6 250 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 Q6ZNX1 250 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 NRARPQ7Z6K4 114 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 C12orf45Q8N5I9 185 aaPredicted RBP4.47□□□□□ -1.69
HDAC1-204ENST00000471488 UBE2WQ96B02 151 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 MRPL53Q96EL3 112 aaKnown RBP4.47□□□□□ -1.69
HDAC1-204ENST00000471488 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 PFDN5Q99471 154 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 NAA50Q9GZZ1 169 aaKnown RBP4.47□□□□□ -1.69
HDAC1-204ENST00000471488 MIXL1Q9H2W2 232 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 SLC39A9Q9NUM3 307 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 KLK12Q9UKR0 248 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 COX11Q9Y6N1 276 aa4.47□□□□□ -1.69
HDAC1-204ENST00000471488 TRAV6A0A075B6T7 132 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 A0A0D9SG52 128 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 RNF222A6NCQ9 220 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 L7N2F9 121 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 NDUFB4O95168 129 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 SFT2D2O95562 160 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 HLA-DQA1P01909 254 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 FAUP35544 74 aaKnown RBP4.46□□□□□ -1.7
HDAC1-204ENST00000471488 CSN1S1P47710 185 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 TIRAPP58753 221 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 VAMP2P63027 116 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 BAXQ07812 192 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms