RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SNCAP37840 140 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 Q5W150 140 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 LYZL1Q6UWQ5 148 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 Q8IYB0 196 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 TMEM242Q9NWH2 141 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 PLEKHH2Q8IVE3 1493 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 PTPRBP23467 1997 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 HELZP42694 1942 aaKnown RBP2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 ABCC3O15438 1527 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 TRAV3A0A0B4J244 114 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 LOC107984156A0A0G2JMH3 177 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 hDV103S1A0JD37 113 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 RBAKDNA6NC62 111 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 LRCOL1A6NCL2 159 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 ZNF705FA8MVS1 300 aaPredicted RBP2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 C17orf112F2Z3M2 114 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 H7C2G1 150 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 K7EP34 96 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 M0R233 179 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 CPSF4O95639 269 aaKnown RBP2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 IGLV1-51P01701 117 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 TRAPPC2P0DI81 140 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 TRAPPC2BP0DI82 140 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 DCDP81605 110 aaKnown RBP2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 UNQ5815/PRO19632Q6UWF5 114 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 ARL17AQ8IVW1 177 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 Q8N814 137 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 TSKUQ8WUA8 353 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 C10orf82Q8WW14 230 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 HHLA3Q9XRX5 114 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 FAM215AQ9Y5M1 114 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 UACAQ9BZF9 1416 aa2.75□□□□□ -1.97
PRPF40A-206ENST00000471167 GAPVD1Q14C86 1478 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 MAGI2Q86UL8 1455 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 IFT140Q96RY7 1462 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 C11orf86A6NJI1 115 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 B4DSR2 109 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 GNGT2O14610 69 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 SSSCA1O60232 199 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 PROSCO94903 275 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 CLPSP04118 112 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 SPRNQ5BIV9 151 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 C12orf73Q69YU5 71 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 Q6ZQT0 140 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 SBSPONQ8IVN8 264 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 S100A13Q99584 98 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 DPH3P1Q9H4G8 78 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 CC2D2AQ9P2K1 1620 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 MYH1P12882 1939 aa2.74□□□□□ -1.97
PRPF40A-206ENST00000471167 TRPM3Q9HCF6 1732 aaPredicted RBP2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 LTBP4Q8N2S1 1624 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 TRAV1-1A0A0B4J248 108 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 E7EQL1 145 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 IL4P05112 153 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 COL8A2P25067 703 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 ROMO1P60602 79 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 NNATQ16517 81 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 ALKAL2Q6UX46 152 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 Q6ZS52 159 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 Q96M85 177 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 SLC50A1Q9BRV3 221 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 CPSF1Q10570 1443 aaKnown RBP2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 PTPRSQ13332 1948 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 ARAP2Q8WZ64 1704 aa2.73□□□□□ -1.97
PRPF40A-206ENST00000471167 ERVK-7P63135 1459 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 NUP214P35658 2090 aaPredicted RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 IGLV3-12A0A075B6K2 115 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 UBE2L5PA0A1B0GUS4 154 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 CYB5AP00167 134 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 CRPP02741 224 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 NMBP08949 121 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 PIRTP0C851 137 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 MGST1P10620 155 aaKnown RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 PIPP12273 146 aaPredicted RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 ASIPP42127 132 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 ATP5EP56381 51 aaPredicted RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 UBE2L3P68036 154 aaKnown RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 ZNF816Q0VGE8 651 aaPredicted RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 INSL4Q14641 139 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 C1orf134Q5TEV5 83 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 C5orf38Q86SI9 138 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 Q8N8P6 123 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 LINC00301Q8NCQ3 95 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 UBALD1Q8TB05 177 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 SMIM7Q9BQ49 75 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 NYNRINQ9P2P1 1898 aaKnown RBP2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 MINOS1-NBL1R4GNA1 71 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 GREB1Q4ZG55 1949 aa2.72□□□□□ -1.97
PRPF40A-206ENST00000471167 SCAF11Q99590 1463 aaKnown RBP2.71□□□□□ -1.97
PRPF40A-206ENST00000471167 HEATR5AQ86XA9 2040 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 TRPM6Q9BX84 2022 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 ABCA3Q99758 1704 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 ABCC5O15440 1437 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 ZSWIM8A7E2V4 1837 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 IGKV1D-42A0A075B6H8 117 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 IGKV2D-24A0A075B6R9 120 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 TRAV14DV4A0A0A6YYC5 116 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms