RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TMPRSS5Q9H3S3 457 aa15.19■□□□□ 0.02
LIME1-203ENST00000465591 KLF12Q9Y4X4 402 aa15.19■□□□□ 0.02
LIME1-203ENST00000465591 TRAV26-1A0A087WT03 109 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 A0A1B0GVY2 172 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 RBAKDNA6NC62 111 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 DIRC3C9JPN6 131 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 C1QBP02746 253 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 ATP6V0CP27449 155 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 CSN1S1P47710 185 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 LINC00336Q6ZUF6 198 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 ZNF680Q8NEM1 530 aa15.18■□□□□ 0.02
LIME1-203ENST00000465591 A0A0J9YY99 117 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 KANTRA0A1W2PQU2 76 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 SERF2P84101 59 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 OR10G4Q8NGN3 311 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 OR10G9Q8NGN4 311 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 OR10G7Q8NGN6 311 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 OR2G3Q8NGZ4 309 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 HYLS1Q96M11 299 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 ATG101Q9BSB4 218 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 LINC00588Q9Y4M8 146 aa15.17■□□□□ 0.02
LIME1-203ENST00000465591 PKHD1P08F94 4074 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 IGHV1OR15-1A0A075B7D0 117 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 TRBV7-9A0A0J9YWB2 115 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 RGS13O14921 159 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 PFDN1O60925 122 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 TCL1AP56279 114 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 ZNRF2Q8NHG8 242 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 OTORQ9NRC9 128 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 PKD1P98161 4303 aa15.16■□□□□ 0.02
LIME1-203ENST00000465591 TRGV1A0A0A0MS02 117 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 A0A1W2PPV4 95 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 PGPA6NDG6 321 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 SPINK4O60575 86 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 MBP02144 154 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 FAM3BP58499 235 aaPredicted RBP15.15■□□□□ 0.02
LIME1-203ENST00000465591 PQLC2Q6ZP29 291 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 RPH3ALQ9UNE2 315 aa15.15■□□□□ 0.02
LIME1-203ENST00000465591 HERC2O95714 4834 aa15.14■□□□□ 0.01
LIME1-203ENST00000465591 DYNC1H1Q14204 4646 aaKnown RBP15.14■□□□□ 0.01
LIME1-203ENST00000465591 PRSS29PA6NIE9 313 aa15.14■□□□□ 0.01
LIME1-203ENST00000465591 BCL2L11O43521 198 aa15.14■□□□□ 0.01
LIME1-203ENST00000465591 EIF5AP63241 154 aaKnown RBP15.14■□□□□ 0.01
LIME1-203ENST00000465591 RXFP4Q8TDU9 374 aa15.14■□□□□ 0.01
LIME1-203ENST00000465591 SH3BGRL3Q9H299 93 aa15.14■□□□□ 0.01
LIME1-203ENST00000465591 CYTL1Q9NRR1 136 aa15.14■□□□□ 0.01
LIME1-203ENST00000465591 DNAH11Q96DT5 4516 aa15.13■□□□□ 0.01
LIME1-203ENST00000465591 ARL14EPLP0DKL9 152 aa15.13■□□□□ 0.01
LIME1-203ENST00000465591 MUC21Q5SSG8 566 aa15.13■□□□□ 0.01
LIME1-203ENST00000465591 IBA57Q5T440 356 aaKnown RBP15.13■□□□□ 0.01
LIME1-203ENST00000465591 TMUB2Q71RG4 321 aa15.13■□□□□ 0.01
LIME1-203ENST00000465591 C18orf15Q96N68 181 aa15.13■□□□□ 0.01
LIME1-203ENST00000465591 KIAA1109Q2LD37 5005 aa15.12■□□□□ 0.01
LIME1-203ENST00000465591 TRGV2A0A075B6R0 118 aa15.12■□□□□ 0.01
LIME1-203ENST00000465591 CDC34P49427 236 aaPredicted RBP15.12■□□□□ 0.01
LIME1-203ENST00000465591 GNG5P63218 68 aa15.12■□□□□ 0.01
LIME1-203ENST00000465591 ZFP69Q49AA0 526 aa15.12■□□□□ 0.01
LIME1-203ENST00000465591 GOLT1AQ6ZVE7 132 aa15.12■□□□□ 0.01
LIME1-203ENST00000465591 VSIG2Q96IQ7 327 aa15.12■□□□□ 0.01
LIME1-203ENST00000465591 ZNF471Q9BX82 626 aaPredicted RBP15.12■□□□□ 0.01
LIME1-203ENST00000465591 MRPL16Q9NX20 251 aaKnown RBP15.12■□□□□ 0.01
LIME1-203ENST00000465591 TRAV8-1A0A0A6YYK1 113 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 STAG3L2P0CL84 134 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 STAG3L3P0CL85 134 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 CCL18P55774 89 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 Q6AWC8 147 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 SSX7Q7RTT5 188 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 CMTM2Q8TAZ6 248 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 RAB24Q969Q5 203 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 TVP23CQ96ET8 276 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 LENEPQ9Y5L5 61 aa15.11■□□□□ 0.01
LIME1-203ENST00000465591 LGALSLQ3ZCW2 172 aaPredicted RBP15.1■□□□□ 0.01
LIME1-203ENST00000465591 TMED6Q8WW62 240 aa15.1■□□□□ 0.01
LIME1-203ENST00000465591 MDFICQ9P1T7 246 aa15.1■□□□□ 0.01
LIME1-203ENST00000465591 NBDYA0A0U1RRE5 68 aa15.09■□□□□ 0.01
LIME1-203ENST00000465591 H3BNG1 76 aa15.08■□□□□ 0
LIME1-203ENST00000465591 IGHV3-53P01767 116 aa15.08■□□□□ 0
LIME1-203ENST00000465591 GCHFRP30047 84 aa15.08■□□□□ 0
LIME1-203ENST00000465591 ESRGQ1W209 222 aa15.08■□□□□ 0
LIME1-203ENST00000465591 FAM74A1Q5RGS3 127 aa15.08■□□□□ 0
LIME1-203ENST00000465591 AKR1C8PQ5T2L2 129 aa15.08■□□□□ 0
LIME1-203ENST00000465591 C1orf134Q5TEV5 83 aa15.08■□□□□ 0
LIME1-203ENST00000465591 SUN5Q8TC36 379 aa15.08■□□□□ 0
LIME1-203ENST00000465591 ACTR3CQ9C0K3 210 aaPredicted RBP15.08■□□□□ 0
LIME1-203ENST00000465591 A0A096LPF7 62 aa15.07■□□□□ 0
LIME1-203ENST00000465591 F6UZH7 168 aa15.07■□□□□ 0
LIME1-203ENST00000465591 TPT1P13693 172 aaKnown RBP15.07■□□□□ 0
LIME1-203ENST00000465591 ZNF415Q09FC8 603 aa15.07■□□□□ 0
LIME1-203ENST00000465591 ARL6IP6Q8N6S5 226 aa15.07■□□□□ 0
LIME1-203ENST00000465591 SGK494Q96LW2 274 aa15.07■□□□□ 0
LIME1-203ENST00000465591 SEC11BP0C7V7 166 aa15.06■□□□□ 0
LIME1-203ENST00000465591 TMEM183BQ1AE95 376 aa15.06■□□□□ 0
LIME1-203ENST00000465591 TMEM183AQ8IXX5 376 aa15.06■□□□□ 0
LIME1-203ENST00000465591 NAGKQ9UJ70 344 aa15.05■□□□□ -0
LIME1-203ENST00000465591 ZNF726P1Q15940 193 aa15.04■□□□□ -0
LIME1-203ENST00000465591 EIF5AL1Q6IS14 154 aaKnown RBP15.04■□□□□ -0
LIME1-203ENST00000465591 FAM159AQ6UWV7 190 aa15.04■□□□□ -0
LIME1-203ENST00000465591 STOML3Q8TAV4 291 aa15.04■□□□□ -0
LIME1-203ENST00000465591 KRTAP1-5Q9BYS1 174 aa15.04■□□□□ -0
LIME1-203ENST00000465591 Q9H8V8 135 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms