RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SGK494Q96LW2 274 aa10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 ATG101Q9BSB4 218 aa10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 PLAC8L1A1L4L8 177 aa10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 CST9LP1Q5W188 147 aa10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 Q6ZTC4 211 aa10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 ZNF767PQ75MW2 155 aa10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 PSG8Q9UQ74 426 aa10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 KLK5Q9Y337 293 aaPredicted RBP10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 ARL2-SNX15V9GYD0 113 aa10.37□□□□□ -0.75
SQSTM1-205ENST00000464493 FBLL1A6NHQ2 334 aaKnown RBP10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 C11orf94C9JXX5 98 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 PAGE4O60829 102 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 Q6ZQT7 251 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 TMEM75Q8N9X5 138 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 HIST1H2BAQ96A08 127 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 TVP23CQ96ET8 276 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 NDFIP1Q9BT67 221 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 TREM1Q9NP99 234 aa10.36□□□□□ -0.75
SQSTM1-205ENST00000464493 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 LYRM9A8MSI8 78 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 PEX7O00628 323 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 RGS13O14921 159 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 IGLV2-11P01706 119 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 PPT1P50897 306 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 FLI1Q01543 452 aaPredicted RBP10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 Q6AWC8 147 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 EIF4E3Q8N5X7 224 aaKnown RBP10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 LINC00479Q96M42 142 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 TCEAL7Q9BRU2 100 aa10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 TIMM8BQ9Y5J9 83 aaPredicted RBP10.35□□□□□ -0.75
SQSTM1-205ENST00000464493 DYNC2H1Q8NCM8 4307 aaKnown RBP10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 IGHV1OR15-1A0A075B7D0 117 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 TRAV10A0A0B4J240 114 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 CBY3A6NI87 242 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 F6UZH7 168 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 ATP5G3P48201 142 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 DAD1P61803 113 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 CCL20P78556 96 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
SQSTM1-205ENST00000464493 DEFB131BA0A096LNP1 70 aa10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 SNURFLB1AK76 121 aa10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 ZNF680Q8NEM1 530 aa10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 PLECQ15149 4684 aaKnown RBP10.33□□□□□ -0.76
SQSTM1-205ENST00000464493 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 DEFB130BP0DP73 79 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 DEFB130AP0DP74 79 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 MUC21Q5SSG8 566 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 ALKAL2Q6UX46 152 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 C8orf49Q96NF6 230 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 MANBALQ9NQG1 85 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 GSN-AS1Q9NRJ2 163 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 TP53TG3Q9ULZ0 132 aa10.32□□□□□ -0.76
SQSTM1-205ENST00000464493 KMT2CQ8NEZ4 4911 aaKnown RBP10.31□□□□□ -0.76
SQSTM1-205ENST00000464493 SMUG1Q53HV7 270 aa10.31□□□□□ -0.76
SQSTM1-205ENST00000464493 C11orf72Q8NBR9 251 aa10.31□□□□□ -0.76
SQSTM1-205ENST00000464493 KLF12Q9Y4X4 402 aa10.31□□□□□ -0.76
SQSTM1-205ENST00000464493 IGLL5B9A064 214 aa10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 GCGP01275 180 aa10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 UBE2G1P62253 170 aa10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 DAZ2Q13117 558 aaKnown RBP10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 IBA57Q5T440 356 aaKnown RBP10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 FMC1Q96HJ9 113 aa10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 LYSTQ99698 3801 aa10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
SQSTM1-205ENST00000464493 AKR1C3P42330 323 aa10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 TCL1AP56279 114 aa10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 TMEM183BQ1AE95 376 aa10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 Q86TA4 180 aa10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 ZFP30Q9Y2G7 519 aa10.29□□□□□ -0.76
SQSTM1-205ENST00000464493 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 S100A9P06702 114 aaKnown RBP10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 PFN1P07737 140 aaKnown RBP10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 HTN3P15516 51 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 TCTAP57738 103 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 LINC00612Q8N6U2 182 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 TXNDC17Q9BRA2 123 aa10.28□□□□□ -0.76
SQSTM1-205ENST00000464493 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 GNRH2O43555 120 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 GAGE7O76087 117 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 IFNA1P01562 189 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms