RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ANXA2R	Q3ZCQ2	193 aa		7.59	□□□□□ -1.19
PTPN7-204	ENST00000462815		Q5VSD8	79 aa		7.59	□□□□□ -1.19
PTPN7-204	ENST00000462815	RPL7L1	Q6DKI1	246 aa	Known RBP	7.59	□□□□□ -1.19
PTPN7-204	ENST00000462815	CDPF1	Q6NVV7	123 aa		7.59	□□□□□ -1.19
PTPN7-204	ENST00000462815	TRBV19	A0A075B6N1	114 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	KANTR	A0A1W2PQU2	76 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	C7orf71	A4D174	169 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	COX7A2P2	O60397	106 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	NXPH4	O95158	308 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	SLC25A5	P05141	298 aa	Known RBP	7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	TCL1A	P56279	114 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	ERCC8	Q13216	396 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	BTN1A1	Q13410	526 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	GUK1	Q16774	197 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	PRR9	Q5T870	116 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	C10orf113	Q5VZT2	155 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815		Q6ZQT7	251 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	ZNF680	Q8NEM1	530 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	MRPL53	Q96EL3	112 aa	Known RBP	7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	WDR61	Q9GZS3	305 aa	Known RBP	7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	FUT9	Q9Y231	359 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	KLF12	Q9Y4X4	402 aa		7.58	□□□□□ -1.2
PTPN7-204	ENST00000462815	FLG2	Q5D862	2391 aa	Predicted RBP	7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815		A0A087WTM6	91 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	UBE2L5P	A0A1B0GUS4	154 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	CRISP2	P16562	243 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	MIC13	Q5XKP0	118 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	ZFAND2A	Q8N6M9	145 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	AGPAT4-IT1	Q9H0P7	198 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	DNAJC4	Q9NNZ3	241 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	TP53TG3	Q9ULZ0	132 aa		7.57	□□□□□ -1.2
PTPN7-204	ENST00000462815	TRGV2	A0A075B6R0	118 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	TRGV1	A0A0A0MS02	117 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	BORCS7-ASMT	A0A0B4J1R7	106 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	MPDU1	O75352	247 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	IFNA5	P01569	189 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	FGF7	P21781	194 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	ATP6V0C	P27449	155 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	CAMLG	P49069	296 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	CRYBA4	P53673	196 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	ERVFC1-1	P60608	527 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	ZNF266	Q14584	549 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	IBA57	Q5T440	356 aa	Known RBP	7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	LYPD5	Q6UWN5	251 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	SLC51B	Q86UW2	128 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	EIF4E3	Q8N5X7	224 aa	Known RBP	7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	STOML3	Q8TAV4	291 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	VGLL1	Q99990	258 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	ZNF471	Q9BX82	626 aa	Predicted RBP	7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	NPCDR1	Q9BY65	106 aa		7.56	□□□□□ -1.2
PTPN7-204	ENST00000462815	FHL2	Q14192	279 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	C9orf47	Q6ZRZ4	202 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	SCGB1C1	Q8TD33	95 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	FRZB	Q92765	325 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	TMEM14C	Q9P0S9	112 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	TIMM9	Q9Y5J7	89 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	ICOS	Q9Y6W8	199 aa		7.55	□□□□□ -1.2
PTPN7-204	ENST00000462815	LRP1	Q07954	4544 aa	Known RBP	7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	EREG	O14944	169 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	PAX4	O43316	350 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	SMR3B	P02814	79 aa	Predicted RBP	7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	PYY	P10082	97 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	RPL29	P47914	159 aa	Known RBP	7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	PDE6H	Q13956	83 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	EXOC3-AS1	Q8N2X6	119 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	HSD17B11	Q8NBQ5	300 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	OR1L4	Q8NGR5	311 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	LINC00477	Q96M19	166 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	PSMG3	Q9BT73	122 aa	Predicted RBP	7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	SH3BGRL3	Q9H299	93 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	SLC39A9	Q9NUM3	307 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	MRPL16	Q9NX20	251 aa	Known RBP	7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	PRO0255	Q9UI72	69 aa		7.54	□□□□□ -1.2
PTPN7-204	ENST00000462815	FAT3	Q8TDW7	4589 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	IGKV2D-40	P01614	121 aa	Predicted RBP	7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	IGHV3-53	P01767	116 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	NMB	P08949	121 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	TPT1	P13693	172 aa	Known RBP	7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	RNASE4	P34096	147 aa	Known RBP	7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	EIF5A	P63241	154 aa	Known RBP	7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	RAB31	Q13636	194 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815		Q6ZRG5	221 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	WFDC10B	Q8IUB3	73 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	OR2G3	Q8NGZ4	309 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	FAM167A-AS1	Q96KT0	104 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	PFDN5	Q99471	154 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	MDFIC	Q9P1T7	246 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	PRELID1	Q9Y255	219 aa		7.53	□□□□□ -1.2
PTPN7-204	ENST00000462815	IGHV1OR15-1	A0A075B7D0	117 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815		K7EQD1	137 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	SEC11B	P0C7V7	166 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	HIST1H1E	P10412	219 aa	Known RBP	7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	IFITM2	Q01629	132 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	ICAM4	Q14773	271 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	GCSAML	Q5JQS6	135 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	NFE4	Q86UQ8	179 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	IQCF2	Q8IXL9	164 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	C8orf49	Q96NF6	230 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	SLC25A2	Q9BXI2	301 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms