RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FAM90A27PA6NNH2 459 aa9.05□□□□□ -0.96
PDZRN3-203ENST00000462146 GOSR1O95249 250 aa9.05□□□□□ -0.96
PDZRN3-203ENST00000462146 RPL24P83731 157 aaKnown RBP9.05□□□□□ -0.96
PDZRN3-203ENST00000462146 S100A7AQ86SG5 101 aa9.05□□□□□ -0.96
PDZRN3-203ENST00000462146 MRPL35Q9NZE8 188 aaKnown RBP9.05□□□□□ -0.96
PDZRN3-203ENST00000462146 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 CEACAM3P40198 252 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 EFNA4P52798 201 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 IGHV7-81A0A0B4J1V7 117 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 SPRY2O43597 315 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 SMIM17P0DL12 118 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 HIGD1BQ9P298 99 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 UFC1Q9Y3C8 167 aa9.04□□□□□ -0.96
PDZRN3-203ENST00000462146 DPM2O94777 84 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 CEND1Q8N111 149 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 NBASA2RRP1 2371 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 ECSCRQ19T08 205 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 C15orf32Q32M92 178 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 Q8N8P6 123 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
PDZRN3-203ENST00000462146 IGHV7-4-1A0A0J9YVY3 117 aa9.02□□□□□ -0.96
PDZRN3-203ENST00000462146 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.96
PDZRN3-203ENST00000462146 NRACQ8N912 160 aa9.02□□□□□ -0.96
PDZRN3-203ENST00000462146 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
PDZRN3-203ENST00000462146 BUB3O43684 328 aa9.02□□□□□ -0.97
PDZRN3-203ENST00000462146 TMEM11P17152 192 aa9.02□□□□□ -0.97
PDZRN3-203ENST00000462146 CDSNQ15517 529 aa9.02□□□□□ -0.97
PDZRN3-203ENST00000462146 Q8N6K4 173 aa9.02□□□□□ -0.97
PDZRN3-203ENST00000462146 CLEC3BP05452 202 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 PRTN3P24158 256 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 VPS13CQ709C8 3753 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 CLPSL1A2RUU4 121 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 J3KRW8 73 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 WFDC2Q14508 124 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 AMTNQ6UX39 209 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 Q8N9W7 124 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 KLK15Q9H2R5 256 aa9.01□□□□□ -0.97
PDZRN3-203ENST00000462146 LINC01548A6NM66 108 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 ATP5LO75964 103 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 LCNL1Q6ZST4 164 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 ZNF502Q8TBZ5 544 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 TM2D2Q9BX73 214 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 MSRB2Q9Y3D2 182 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 IGLL5B9A064 214 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 G3V318 75 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 LAGE3Q14657 143 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 PRR9Q5T870 116 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 CLEC19AQ6UXS0 136 aa9□□□□□ -0.97
PDZRN3-203ENST00000462146 M0R1W7 72 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 ATP6V0E1O15342 81 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 IGF1P05019 195 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 CCDC140Q96MF4 163 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 E9PLD3 99 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 H3BMG7 143 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 H3BVH4 76 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 ZFP36P26651 326 aaKnown RBP8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 FOXC1Q12948 553 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 MYOZ3Q8TDC0 251 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 SPTBN4Q9H254 2564 aa8.99□□□□□ -0.97
PDZRN3-203ENST00000462146 SH2D6Q7Z4S9 175 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 A0A087WX48 190 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 C12orf74Q32Q52 190 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 ZNF479Q96JC4 524 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 DEFB1P60022 68 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 TMEM78Q5T7P6 136 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 SPANXN1Q5VSR9 72 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 VKORC1Q9BQB6 163 aa8.98□□□□□ -0.97
PDZRN3-203ENST00000462146 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 TIMD4Q96H15 378 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 TSSC4Q9Y5U2 329 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 SPTBN1Q01082 2364 aaKnown RBP8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 SCGB2A1O75556 95 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 EBI3Q14213 229 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 SAMD13Q5VXD3 122 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 CCDC144NLQ6NUI1 221 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 FAM110DQ8TAY7 271 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 SPANXB1Q9NS25 103 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-203ENST00000462146 PTPRQQ9UMZ3 2332 aa8.96□□□□□ -0.97
PDZRN3-203ENST00000462146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.96□□□□□ -0.97
PDZRN3-203ENST00000462146 AZU1P20160 251 aa8.96□□□□□ -0.97
PDZRN3-203ENST00000462146 SLC50A1Q9BRV3 221 aa8.96□□□□□ -0.97
PDZRN3-203ENST00000462146 SPTA1P02549 2419 aa8.96□□□□□ -0.98
PDZRN3-203ENST00000462146 SMAGPQ0VAQ4 97 aa8.96□□□□□ -0.98
PDZRN3-203ENST00000462146 ETDBQ3ZM63 59 aa8.96□□□□□ -0.98
PDZRN3-203ENST00000462146 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-203ENST00000462146 TRBV7-3A0A075B6L6 115 aa8.95□□□□□ -0.98
PDZRN3-203ENST00000462146 DEFB104AQ8WTQ1 72 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms