RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 MYOZ3Q8TDC0 251 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 CCL17Q92583 94 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 A0A0G2JNJ9 132 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 C22orf34Q6ZV56 151 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 Q8TAT8 98 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 Q9UFV3 132 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 CD40P25942 277 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 LOXP28300 417 aaPredicted RBP12.05□□□□□ -0.48
SSR4-206ENST00000460616 FOXI1Q12951 378 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 Q8N8P6 123 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
SSR4-206ENST00000460616 C17orf100A8MU93 164 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 CNIH1O95406 144 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
SSR4-206ENST00000460616 TMEM155Q4W5P6 130 aa12.05□□□□□ -0.48
SSR4-206ENST00000460616 CHD6Q8TD26 2715 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 IGHV1-3A0A0C4DH29 117 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 CNFNQ9BYD5 112 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 DLX1P56177 255 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 SYT8Q8NBV8 401 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 RPEQ96AT9 228 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 CTSZQ9UBR2 303 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 CYSLTR1Q9Y271 337 aa12.04□□□□□ -0.48
SSR4-206ENST00000460616 TRBV7-3A0A075B6L6 115 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
SSR4-206ENST00000460616 NDUFA3O95167 84 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 PRB3Q04118 309 aaPredicted RBP12.03□□□□□ -0.48
SSR4-206ENST00000460616 DTX2Q86UW9 622 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 S4R3C0 116 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 A0A087WX48 190 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 TNFRSF13BO14836 293 aaPredicted RBP12.03□□□□□ -0.48
SSR4-206ENST00000460616 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 GNLYP22749 145 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
SSR4-206ENST00000460616 C1QTNF4Q9BXJ3 329 aa12.03□□□□□ -0.48
SSR4-206ENST00000460616 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.48
SSR4-206ENST00000460616 CCL21O00585 134 aa12.02□□□□□ -0.48
SSR4-206ENST00000460616 PLNP26678 52 aa12.02□□□□□ -0.48
SSR4-206ENST00000460616 FAM27E3Q08E93 113 aa12.02□□□□□ -0.48
SSR4-206ENST00000460616 CDIP1Q9H305 208 aa12.02□□□□□ -0.48
SSR4-206ENST00000460616 ZNF462Q96JM2 2506 aa12.02□□□□□ -0.48
SSR4-206ENST00000460616 ADGRG4Q8IZF6 3080 aa12.02□□□□□ -0.49
SSR4-206ENST00000460616 FABP5P3A8MUU1 101 aa12.02□□□□□ -0.49
SSR4-206ENST00000460616 SRSF2Q01130 221 aaKnown RBP12.02□□□□□ -0.49
SSR4-206ENST00000460616 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
SSR4-206ENST00000460616 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
SSR4-206ENST00000460616 VKORC1Q9BQB6 163 aa12.02□□□□□ -0.49
SSR4-206ENST00000460616 KLRD1Q13241 179 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 LAGE3Q14657 143 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 MORN3Q6PF18 240 aaPredicted RBP12.01□□□□□ -0.49
SSR4-206ENST00000460616 NUP37Q8NFH4 326 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
SSR4-206ENST00000460616 PLCE1Q9P212 2302 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 CDSNQ15517 529 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 IGFL4Q6B9Z1 124 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
SSR4-206ENST00000460616 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
SSR4-206ENST00000460616 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
SSR4-206ENST00000460616 BUB1B-PAK6H3BSN5 160 aa12□□□□□ -0.49
SSR4-206ENST00000460616 IGLV1-47P01700 117 aa12□□□□□ -0.49
SSR4-206ENST00000460616 ADORA2A-AS1P86434 159 aa12□□□□□ -0.49
SSR4-206ENST00000460616 CFAP126Q5VTH2 177 aa12□□□□□ -0.49
SSR4-206ENST00000460616 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
SSR4-206ENST00000460616 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
SSR4-206ENST00000460616 RPL7P18124 248 aaKnown RBP12□□□□□ -0.49
SSR4-206ENST00000460616 ADIPOQQ15848 244 aa12□□□□□ -0.49
SSR4-206ENST00000460616 NFE4Q86UQ8 179 aa12□□□□□ -0.49
SSR4-206ENST00000460616 LINC01619G3V211 115 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
SSR4-206ENST00000460616 DLX4Q92988 240 aaPredicted RBP11.99□□□□□ -0.49
SSR4-206ENST00000460616 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 FAM208BQ5VWN6 2430 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 OR11H12B2RN74 326 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 MT-ATP8P03928 68 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 OR11H1Q8NG94 326 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 OR11H2Q8NH07 326 aa11.99□□□□□ -0.49
SSR4-206ENST00000460616 HLA-DMBP28068 263 aa11.98□□□□□ -0.49
SSR4-206ENST00000460616 H7C1H1 209 aa11.98□□□□□ -0.49
SSR4-206ENST00000460616 IGHG4P01861 327 aa11.98□□□□□ -0.49
SSR4-206ENST00000460616 EFNA4P52798 201 aa11.98□□□□□ -0.49
SSR4-206ENST00000460616 KAAG1Q9UBP8 84 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 AGRNO00468 2067 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
SSR4-206ENST00000460616 FLNCQ14315 2725 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 PSMB2P49721 201 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 MFAP4P55083 255 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 Q6ZUT4 128 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 RNF5Q99942 180 aa11.97□□□□□ -0.49
SSR4-206ENST00000460616 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 FAM90A27PA6NNH2 459 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 F8VRH5 84 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 TRGV3P03979 118 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 XGP55808 180 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 ERCC8Q13216 396 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 NRACQ8N912 160 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 GLMPQ8WWB7 406 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
SSR4-206ENST00000460616 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms