RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
TMEM220-202ENST00000455996 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 NIPBLQ6KC79 2804 aaeCLIP12.03□□□□□ -0.48
TMEM220-202ENST00000455996 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 A8MTW9 85 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
TMEM220-202ENST00000455996 PF4P02776 101 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 NEU1Q99519 415 aa12.03□□□□□ -0.48
TMEM220-202ENST00000455996 RPS10P46783 165 aaKnown RBP12.02□□□□□ -0.49
TMEM220-202ENST00000455996 TCL1AP56279 114 aa12.02□□□□□ -0.49
TMEM220-202ENST00000455996 LINC01559Q495D7 138 aa12.02□□□□□ -0.49
TMEM220-202ENST00000455996 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.49
TMEM220-202ENST00000455996 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
TMEM220-202ENST00000455996 NUP35Q8NFH5 326 aa12.02□□□□□ -0.49
TMEM220-202ENST00000455996 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
TMEM220-202ENST00000455996 TEP1Q99973 2627 aaKnown RBP12.02□□□□□ -0.49
TMEM220-202ENST00000455996 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
TMEM220-202ENST00000455996 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
TMEM220-202ENST00000455996 KLLNB2CW77 178 aa12.01□□□□□ -0.49
TMEM220-202ENST00000455996 SAP30O75446 220 aa12.01□□□□□ -0.49
TMEM220-202ENST00000455996 RPS20P60866 119 aaKnown RBP12.01□□□□□ -0.49
TMEM220-202ENST00000455996 PRR9Q5T870 116 aa12.01□□□□□ -0.49
TMEM220-202ENST00000455996 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
TMEM220-202ENST00000455996 MAP6D1Q9H9H5 199 aa12.01□□□□□ -0.49
TMEM220-202ENST00000455996 TMEM189A5PLL7 270 aa12□□□□□ -0.49
TMEM220-202ENST00000455996 HIGD1CA8MV81 97 aa12□□□□□ -0.49
TMEM220-202ENST00000455996 DEFB131AP59861 70 aa12□□□□□ -0.49
TMEM220-202ENST00000455996 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
TMEM220-202ENST00000455996 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
TMEM220-202ENST00000455996 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 PHOX2AO14813 284 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 HLA-DRB4P13762 266 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 LEPP41159 167 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 Q6AWC8 147 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 RASL11AQ6T310 242 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 AMTNQ6UX39 209 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 ATP5L2Q7Z4Y8 100 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 HLA-DRB4X5D2U9 266 aa11.99□□□□□ -0.49
TMEM220-202ENST00000455996 CD33P20138 364 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
TMEM220-202ENST00000455996 ODF3L2Q3SX64 289 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 COX19Q49B96 90 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 CLUHP3Q96NS8 147 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 ZNF747Q9BV97 191 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 C11orf21Q9P2W6 132 aa11.98□□□□□ -0.49
TMEM220-202ENST00000455996 TRAV21A0A0B4J279 112 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 H3BMM0 161 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 GZMBP10144 247 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 INSL3P51460 131 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 BEAN1Q3B7T3 259 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 KRTAP3-3Q9BYR6 98 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 KRTAP3-2Q9BYR7 98 aa11.97□□□□□ -0.49
TMEM220-202ENST00000455996 IGKV3D-20A0A0C4DH25 116 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 TRGC2P03986 189 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 GPX1P07203 203 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 IGLC6P0CF74 106 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 TSPOP30536 169 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 RAB5BP61020 215 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 ACTL10Q5JWF8 245 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 GNB1LQ9BYB4 327 aa11.96□□□□□ -0.49
TMEM220-202ENST00000455996 ATRQ13535 2644 aa11.96□□□□□ -0.5
TMEM220-202ENST00000455996 KNCNA6PVL3 124 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 ORM1P02763 201 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 TENM1Q9UKZ4 2725 aa11.95□□□□□ -0.5
TMEM220-202ENST00000455996 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
TMEM220-202ENST00000455996 CTRLP40313 264 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 KIR3DS1Q14943 382 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
TMEM220-202ENST00000455996 Q6ZQT7 251 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 TMEM136Q6ZRR5 245 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 C7orf71A4D174 169 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 OR11H12B2RN74 326 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 SPINK4O60575 86 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 MT-ND6P03923 174 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 CDKN1BP46527 198 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 C9orf66Q5T8R8 295 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 LURAP1LQ8IV03 231 aa11.94□□□□□ -0.5
TMEM220-202ENST00000455996 SORL1Q92673 2214 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 A0A1B0GUT8 65 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 A0A1B0GW15 77 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 RBMY1BA6NDE4 496 aaKnown RBP11.93□□□□□ -0.5
TMEM220-202ENST00000455996 RBMY1EA6NEQ0 496 aaKnown RBP11.93□□□□□ -0.5
TMEM220-202ENST00000455996 ZNF324O75467 553 aaPredicted RBP11.93□□□□□ -0.5
TMEM220-202ENST00000455996 RBMY1DP0C7P1 496 aaKnown RBP11.93□□□□□ -0.5
TMEM220-202ENST00000455996 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 FER1L6-AS1Q8NA97 138 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 FRZBQ92765 325 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 CNFNQ9BYD5 112 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 C19orf73Q9NVV2 129 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
TMEM220-202ENST00000455996 J3KRW8 73 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms